Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00023919 |
| length | 952 |
| lncRNA type | retained_intron |
| GC content | 0.52 |
| exon number | 5 |
| gene id | XLOC_012134 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007128.7 |
| NCBI id | CM002901.2 |
| chromosome length | 53461100 |
| location | 25609826 ~ 25630848 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0043087 | regulation of GTPase activity | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005179 | hormone activity | molecular_function |
| id | description |
|---|---|
| ko04131 | Membrane trafficking |
| id | description |
|---|---|
| ZDB-GENE-030616-610 | Predicted to enable GTPase activator activity and hormone activity. Predicted to be involved in regulation of GTPase activity. Predicted to be located in cytoplasm and extracellular region. Human ortholog(s) of this gene implicated in Martsolf syndrome and Warburg micro syndrome 2. Orthologous to human RAB3GAP2 (RAB3 GTPase activating non-catalytic protein subunit 2). |
| ensembl_id | ENSDART00000151942 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00024908 | lncRNA | downstream | 24137 | 25585487 ~ 25586857 (-) | False | XLOC_012132 |
| TCONS_00024907 | lncRNA | downstream | 88639 | 25512924 ~ 25522355 (-) | False | XLOC_012130 |
| TCONS_00024906 | lncRNA | downstream | 364384 | 25244438 ~ 25246610 (-) | True | XLOC_012124 |
| TCONS_00023901 | lncRNA | downstream | 413393 | 25188611 ~ 25197601 (-) | False | XLOC_012123 |
| TCONS_00023900 | lncRNA | downstream | 413393 | 25188611 ~ 25197601 (-) | True | XLOC_012123 |
| TCONS_00023921 | lncRNA | upstream | 23826 | 25639564 ~ 25649038 (-) | True | XLOC_012135 |
| TCONS_00023923 | lncRNA | upstream | 34273 | 25650011 ~ 25650867 (-) | False | XLOC_012136 |
| TCONS_00023924 | lncRNA | upstream | 54101 | 25669839 ~ 25670528 (-) | True | XLOC_012136 |
| TCONS_00023929 | lncRNA | upstream | 277684 | 25893422 ~ 25897784 (-) | True | XLOC_012141 |
| TCONS_00024909 | lncRNA | upstream | 337772 | 25953510 ~ 25955190 (-) | True | XLOC_012142 |
| TCONS_00023913 | mRNA | downstream | 47147 | 25550235 ~ 25563847 (-) | True | XLOC_012131 |
| TCONS_00023911 | mRNA | downstream | 213436 | 25392842 ~ 25397558 (-) | True | XLOC_012129 |
| TCONS_00023910 | mRNA | downstream | 215599 | 25392524 ~ 25395395 (-) | False | XLOC_012129 |
| TCONS_00023908 | mRNA | downstream | 228618 | 25344734 ~ 25382376 (-) | False | XLOC_012128 |
| TCONS_00023920 | mRNA | upstream | 20215 | 25635953 ~ 25649079 (-) | False | XLOC_012135 |
| TCONS_00023922 | mRNA | upstream | 34201 | 25649939 ~ 25737452 (-) | False | XLOC_012136 |
| TCONS_00023925 | mRNA | upstream | 161592 | 25777330 ~ 25831569 (-) | True | XLOC_012137 |
| TCONS_00023926 | mRNA | upstream | 205650 | 25821388 ~ 25847551 (-) | True | XLOC_012138 |
| TCONS_00023927 | mRNA | upstream | 245455 | 25861193 ~ 25861787 (-) | True | XLOC_012139 |
| TCONS_00023915 | other | downstream | 22564 | 25587625 ~ 25588430 (-) | True | XLOC_012133 |
| TCONS_00023914 | other | downstream | 24136 | 25585487 ~ 25586858 (-) | True | XLOC_012132 |
| TCONS_00023912 | other | downstream | 88243 | 25512924 ~ 25522751 (-) | True | XLOC_012130 |
| TCONS_00023894 | other | downstream | 673115 | 24917350 ~ 24937879 (-) | False | XLOC_012122 |
| TCONS_00023897 | other | downstream | 673310 | 24932691 ~ 24937684 (-) | False | XLOC_012122 |
| TCONS_00023928 | other | upstream | 248567 | 25864305 ~ 25864419 (-) | True | XLOC_012140 |
| TCONS_00023940 | other | upstream | 1100422 | 26716160 ~ 26720994 (-) | True | XLOC_012146 |
| TCONS_00023944 | other | upstream | 1251953 | 26867691 ~ 26874040 (-) | True | XLOC_012148 |
| TCONS_00023954 | other | upstream | 1587383 | 27203121 ~ 27205806 (-) | False | XLOC_012154 |
| TCONS_00023956 | other | upstream | 1599153 | 27214891 ~ 27235466 (-) | True | XLOC_012154 |
