RNA id: TCONS_00024057


Basic Information

Item Value
RNA id TCONS_00024057
length 115
RNA type rRNA
GC content 0.56
exon number 1
gene id XLOC_012208
representative True

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 31384434 ~ 31384548 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tccagcagctagctctctgcaactctcacatggtagCGCACTGAAGCCTAGCAGGGCTgaacccggtcagtacctggatgggagatgatatgggaaagctaggttgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000185124

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00024933 lncRNA downstream 23835 31349711 ~ 31360599 (-) False XLOC_012207
TCONS_00024054 lncRNA downstream 32187 31349711 ~ 31352247 (-) False XLOC_012207
TCONS_00024050 lncRNA downstream 162898 31218882 ~ 31221536 (-) True XLOC_012205
TCONS_00024044 lncRNA downstream 199191 31182644 ~ 31185243 (-) False XLOC_012203
TCONS_00024043 lncRNA downstream 199191 31182644 ~ 31185243 (-) False XLOC_012203
TCONS_00024063 lncRNA upstream 223992 31608540 ~ 31611613 (-) True XLOC_012211
TCONS_00024070 lncRNA upstream 317793 31702341 ~ 31705509 (-) True XLOC_012215
TCONS_00024934 lncRNA upstream 743349 32127897 ~ 32135852 (-) False XLOC_012218
TCONS_00024935 lncRNA upstream 743349 32127897 ~ 32136128 (-) True XLOC_012218
TCONS_00024075 lncRNA upstream 982558 32367106 ~ 32368787 (-) True XLOC_012220
TCONS_00024056 mRNA downstream 23478 31355516 ~ 31360956 (-) True XLOC_012207
TCONS_00024053 mRNA downstream 23483 31346560 ~ 31360951 (-) False XLOC_012207
TCONS_00024051 mRNA downstream 40034 31276437 ~ 31344400 (-) False XLOC_012206
TCONS_00024052 mRNA downstream 75776 31278985 ~ 31308658 (-) True XLOC_012206
TCONS_00024047 mRNA downstream 162660 31214190 ~ 31221774 (-) False XLOC_012205
TCONS_00024058 mRNA upstream 16036 31400584 ~ 31483469 (-) False XLOC_012209
TCONS_00024059 mRNA upstream 16159 31400707 ~ 31483469 (-) True XLOC_012209
TCONS_00024060 mRNA upstream 151216 31535764 ~ 31579733 (-) False XLOC_012210
TCONS_00024061 mRNA upstream 151258 31535806 ~ 31579715 (-) True XLOC_012210
TCONS_00024062 mRNA upstream 222087 31606635 ~ 31611692 (-) False XLOC_012211
TCONS_00024055 other downstream 23835 31352195 ~ 31360599 (-) False XLOC_012207
TCONS_00024027 other downstream 472812 30905714 ~ 30911622 (-) False XLOC_012199
TCONS_00024025 other downstream 482562 30900772 ~ 30901872 (-) False XLOC_012199
TCONS_00024018 other downstream 749139 30621420 ~ 30635295 (-) True XLOC_012194
TCONS_00024011 other downstream 1179905 30176436 ~ 30204529 (-) False XLOC_012187
TCONS_00024073 other upstream 861581 32246129 ~ 32246255 (-) True XLOC_012219
TCONS_00024076 other upstream 1006508 32391056 ~ 32401688 (-) False XLOC_012221
TCONS_00024082 other upstream 1038886 32423434 ~ 32426104 (-) True XLOC_012221
TCONS_00024092 other upstream 1361844 32746392 ~ 32752905 (-) False XLOC_012226
TCONS_00024093 other upstream 1365627 32750175 ~ 32753284 (-) False XLOC_012226