Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00024085 |
| length | 901 |
| lncRNA type | retained_intron |
| GC content | 0.46 |
| exon number | 5 |
| gene id | XLOC_012223 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007128.7 |
| NCBI id | CM002901.2 |
| chromosome length | 53461100 |
| location | 32630789 ~ 32636533 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-131121-137 | Predicted to enable calcium ion binding activity. Orthologous to human CGREF1 (cell growth regulator with EF-hand domain 1). |
| ensembl_id | ENSDART00000155002 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00024079 | lncRNA | downstream | 222715 | 32391056 ~ 32408399 (-) | False | XLOC_012221 |
| TCONS_00024075 | lncRNA | downstream | 262327 | 32367106 ~ 32368787 (-) | True | XLOC_012220 |
| TCONS_00024935 | lncRNA | downstream | 494986 | 32127897 ~ 32136128 (-) | True | XLOC_012218 |
| TCONS_00024934 | lncRNA | downstream | 495262 | 32127897 ~ 32135852 (-) | False | XLOC_012218 |
| TCONS_00024070 | lncRNA | downstream | 925605 | 31702341 ~ 31705509 (-) | True | XLOC_012215 |
| TCONS_00024936 | lncRNA | upstream | 110614 | 32746392 ~ 32753284 (-) | False | XLOC_012226 |
| TCONS_00024094 | lncRNA | upstream | 127565 | 32763343 ~ 32779442 (-) | False | XLOC_012226 |
| TCONS_00024937 | lncRNA | upstream | 498041 | 33133819 ~ 33138376 (-) | True | XLOC_012228 |
| TCONS_00024938 | lncRNA | upstream | 509816 | 33145594 ~ 33162478 (-) | True | XLOC_012229 |
| TCONS_00024098 | lncRNA | upstream | 571002 | 33206780 ~ 33231714 (-) | False | XLOC_012230 |
| TCONS_00024083 | mRNA | downstream | 10011 | 32608010 ~ 32621103 (-) | True | XLOC_012222 |
| TCONS_00024078 | mRNA | downstream | 204701 | 32391095 ~ 32426413 (-) | False | XLOC_012221 |
| TCONS_00024077 | mRNA | downstream | 204722 | 32391095 ~ 32426392 (-) | False | XLOC_012221 |
| TCONS_00024081 | mRNA | downstream | 204722 | 32407721 ~ 32426392 (-) | False | XLOC_012221 |
| TCONS_00024080 | mRNA | downstream | 217967 | 32396388 ~ 32413147 (-) | False | XLOC_012221 |
| TCONS_00024086 | mRNA | upstream | 21424 | 32657202 ~ 32698517 (-) | False | XLOC_012224 |
| TCONS_00024087 | mRNA | upstream | 26264 | 32662042 ~ 32698503 (-) | True | XLOC_012224 |
| TCONS_00024089 | mRNA | upstream | 84635 | 32720413 ~ 32743249 (-) | False | XLOC_012225 |
| TCONS_00024088 | mRNA | upstream | 84635 | 32720413 ~ 32743249 (-) | False | XLOC_012225 |
| TCONS_00024090 | mRNA | upstream | 86387 | 32722165 ~ 32743044 (-) | True | XLOC_012225 |
| TCONS_00024082 | other | downstream | 205010 | 32423434 ~ 32426104 (-) | True | XLOC_012221 |
| TCONS_00024076 | other | downstream | 229426 | 32391056 ~ 32401688 (-) | False | XLOC_012221 |
| TCONS_00024073 | other | downstream | 384859 | 32246129 ~ 32246255 (-) | True | XLOC_012219 |
| TCONS_00024057 | other | downstream | 1246566 | 31384434 ~ 31384548 (-) | True | XLOC_012208 |
| TCONS_00024055 | other | downstream | 1270515 | 31352195 ~ 31360599 (-) | False | XLOC_012207 |
| TCONS_00024092 | other | upstream | 110614 | 32746392 ~ 32752905 (-) | False | XLOC_012226 |
| TCONS_00024093 | other | upstream | 114397 | 32750175 ~ 32753284 (-) | False | XLOC_012226 |
| TCONS_00024095 | other | upstream | 139139 | 32774917 ~ 32779442 (-) | True | XLOC_012226 |
| TCONS_00024101 | other | upstream | 602539 | 33238317 ~ 33239286 (-) | True | XLOC_012231 |
| TCONS_00024113 | other | upstream | 1055920 | 33691698 ~ 33705464 (-) | False | XLOC_012236 |
