Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU596 |
| length | 614 |
| lncRNA type | inter_gene |
| GC content | 0.58 |
| exon number | 2 |
| gene id | slc9a7 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 781840 ~ 1244153 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006885 | regulation of pH | biological_process |
| GO:0055085 | transmembrane transport | biological_process |
| GO:0006814 | sodium ion transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0015385 | sodium | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU600 | lncRNA | upstream | 1381 | 970541 ~ 974094 (+) | False | slc9a7 |
| TU599 | lncRNA | upstream | 1381 | 972942 ~ 974094 (+) | False | slc9a7 |
| TU686 | lncRNA | upstream | 7258 | 967804 ~ 968217 (+) | True | G562 |
| TU675 | lncRNA | upstream | 33930 | 941299 ~ 941545 (+) | True | G551 |
| TU665 | lncRNA | upstream | 58085 | 910169 ~ 917390 (+) | True | G545 |
| TU695 | lncRNA | downstream | 11980 | 988089 ~ 1045254 (+) | True | G571 |
| TU709 | lncRNA | downstream | 31273 | 1007382 ~ 1010207 (+) | True | G583 |
| TU825 | lncRNA | downstream | 248985 | 1225094 ~ 1225527 (+) | True | G663 |
| TU831 | lncRNA | downstream | 268248 | 1244357 ~ 1245764 (+) | True | G669 |
| TU836 | lncRNA | downstream | 276905 | 1253014 ~ 1254747 (+) | True | G674 |
| XM_036977980.1 | mRNA | upstream | 3366 | 781840 ~ 972109 (+) | False | slc9a7 |
| XM_021602630.2 | mRNA | upstream | 357880 | 602103 ~ 617595 (+) | True | nit2 |
| XM_036977245.1 | mRNA | upstream | 478347 | 439966 ~ 497128 (+) | False | tbc1d23 |
| XM_036978058.1 | mRNA | downstream | 113287 | 1089396 ~ 1133908 (+) | True | tubgcp5 |
| XM_036978346.1 | mRNA | downstream | 197602 | 1173711 ~ 1298805 (+) | False | cyfip1 |
| XM_036978398.1 | mRNA | downstream | 197602 | 1173711 ~ 1299204 (+) | False | cyfip1 |
| XM_036978300.1 | mRNA | downstream | 197602 | 1173711 ~ 1299441 (+) | False | cyfip1 |
| XM_036978109.1 | mRNA | downstream | 197604 | 1173713 ~ 1300624 (+) | False | cyfip1 |
| TU206 | other | upstream | 655501 | 318047 ~ 319974 (+) | False | G166 |
| TU83 | other | upstream | 845212 | 120466 ~ 130263 (+) | True | G51 |
| TU80 | other | upstream | 855168 | 112959 ~ 120307 (+) | True | G50 |
| TU55 | other | upstream | 881757 | 56555 ~ 93718 (+) | True | G26 |
| TU47 | other | upstream | 903176 | 52711 ~ 72299 (+) | True | G19 |
| TU707 | other | downstream | 27674 | 1003783 ~ 1009153 (+) | False | G583 |
| TU710 | other | downstream | 27674 | 1003783 ~ 1010207 (+) | False | G583 |
| TU1201 | other | downstream | 1102789 | 2078898 ~ 2079603 (+) | False | G961 |
| TU1202 | other | downstream | 1102789 | 2078898 ~ 2079603 (+) | False | G961 |
| TU1203 | other | downstream | 1102789 | 2078898 ~ 2079603 (+) | True | G961 |
