Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005039281.1 |
| length | 432 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 3 |
| gene id | LOC118943893 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 8224365 ~ 8225267 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0034220 | ion transmembrane transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005230 | extracellular ligand-gated ion channel activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU8505 | lncRNA | upstream | 27346 | 8117910 ~ 8197019 (+) | True | LOC100135997 |
| TU8532 | lncRNA | upstream | 76888 | 8145046 ~ 8147477 (+) | True | G6912 |
| TU8412 | lncRNA | upstream | 136620 | 8086029 ~ 8087745 (+) | False | G6821 |
| TU8417 | lncRNA | upstream | 136620 | 8087210 ~ 8087745 (+) | True | G6821 |
| TU8415 | lncRNA | upstream | 136768 | 8087210 ~ 8087597 (+) | False | G6821 |
| TU8586 | lncRNA | downstream | 15168 | 8240435 ~ 8240724 (+) | True | G6964 |
| TU8589 | lncRNA | downstream | 18016 | 8243283 ~ 8249184 (+) | True | G6967 |
| TU8594 | lncRNA | downstream | 27195 | 8252462 ~ 8252670 (+) | True | G6969 |
| TU8603 | lncRNA | downstream | 38383 | 8263650 ~ 8263921 (+) | True | G6978 |
| TU8608 | lncRNA | downstream | 47669 | 8272936 ~ 8274241 (+) | True | G6983 |
| XM_036989287.1 | mRNA | upstream | 10478 | 8209333 ~ 8213887 (+) | True | LOC110497697 |
| XM_021611929.2 | mRNA | upstream | 24699 | 8192682 ~ 8199666 (+) | True | LOC110529566 |
| XM_021611716.2 | mRNA | upstream | 33137 | 8187929 ~ 8191228 (+) | True | LOC110529481 |
| XM_036974755.1 | mRNA | upstream | 40334 | 8182237 ~ 8184031 (+) | False | LOC100135997 |
| XM_036989290.1 | mRNA | downstream | 3922 | 8229189 ~ 8231566 (+) | False | LOC110501328 |
| XM_036989291.1 | mRNA | downstream | 30606 | 8255873 ~ 8271732 (+) | False | LOC110505168 |
| XM_036987202.1 | mRNA | downstream | 261387 | 8486654 ~ 8494344 (+) | True | LOC110529807 |
| XM_036989292.1 | mRNA | downstream | 377458 | 8602725 ~ 8612667 (+) | False | LOC110515166 |
| LOC110532690 | mRNA | downstream | 399619 | 8624886 ~ 8634174 (+) | True | LOC110532690 |
| TU8398 | other | upstream | 187211 | 8036617 ~ 8037154 (+) | True | G6807 |
| TU8049 | other | upstream | 338458 | 7885391 ~ 7885907 (+) | True | G6518 |
| TU7952 | other | upstream | 498756 | 7725046 ~ 7725609 (+) | True | G6434 |
| TU6993 | other | upstream | 1412744 | 6810994 ~ 6811621 (+) | True | G5581 |
| TU6645 | other | upstream | 1706176 | 6517482 ~ 6518189 (+) | True | G5276 |
| TU8580 | other | downstream | 4030 | 8229297 ~ 8230235 (+) | True | LOC110501328 |
| TU8596 | other | downstream | 29875 | 8255142 ~ 8255878 (+) | True | LOC110505168 |
| TU9946 | other | downstream | 1233681 | 9458948 ~ 9459953 (+) | True | LOC118966784 |
| TU10089 | other | downstream | 1758508 | 9983775 ~ 9984464 (+) | False | LOC110510920 |
| TU9934 | other | downstream | 1760115 | 9985382 ~ 9991542 (+) | True | LOC110510920 |
