Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021587979.2 |
| length | 909 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 5 |
| gene id | lim2.2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 10104169 ~ 10107888 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005212 | structural constituent of eye lens | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU10148 | lncRNA | upstream | 20540 | 10081168 ~ 10083667 (+) | True | G8295 |
| TU10094 | lncRNA | upstream | 51131 | 10051041 ~ 10053076 (+) | True | G8253 |
| TU10108 | lncRNA | upstream | 92140 | 10011850 ~ 10012067 (+) | True | G8266 |
| TU10107 | lncRNA | upstream | 92977 | 10011016 ~ 10011230 (+) | True | G8265 |
| TU10106 | lncRNA | upstream | 94857 | 10009020 ~ 10009350 (+) | True | G8264 |
| TU10165 | lncRNA | downstream | 11122 | 10119010 ~ 10134267 (+) | True | G8304 |
| TU10493 | lncRNA | downstream | 29446 | 10137334 ~ 10137566 (+) | True | G8600 |
| TU10555 | lncRNA | downstream | 112456 | 10220344 ~ 10222076 (+) | True | G8651 |
| TU10556 | lncRNA | downstream | 114369 | 10222257 ~ 10224611 (+) | True | G8652 |
| TU10603 | lncRNA | downstream | 191994 | 10299882 ~ 10301188 (+) | False | G8695 |
| XM_036939042.1 | mRNA | upstream | 2570 | 10096943 ~ 10101637 (+) | False | asb3 |
| XM_021617595.2 | mRNA | upstream | 2570 | 10096944 ~ 10101637 (+) | False | asb3 |
| XM_021617682.2 | mRNA | upstream | 2570 | 10096944 ~ 10101637 (+) | True | asb3 |
| XM_036938825.1 | mRNA | upstream | 7450 | 10087300 ~ 10096757 (+) | True | ftsj3 |
| XM_021617177.2 | mRNA | upstream | 55530 | 10027421 ~ 10048677 (+) | True | LOC110533060 |
| XM_021618308.2 | mRNA | downstream | 32342 | 10140230 ~ 10162948 (+) | False | gipc3 |
| XM_036940763.1 | mRNA | downstream | 1325214 | 11433102 ~ 11492490 (+) | False | LOC110523899 |
| XM_036940849.1 | mRNA | downstream | 1325214 | 11433102 ~ 11492490 (+) | False | LOC110523899 |
| XM_036940803.1 | mRNA | downstream | 1325215 | 11433103 ~ 11492489 (+) | False | LOC110523899 |
| XM_036940911.1 | mRNA | downstream | 1325215 | 11433103 ~ 11492489 (+) | False | LOC110523899 |
| TU9934 | other | upstream | 112665 | 9985382 ~ 9991542 (+) | True | LOC110510920 |
| TU10089 | other | upstream | 119743 | 9983775 ~ 9984464 (+) | False | LOC110510920 |
| TU9946 | other | upstream | 644254 | 9458948 ~ 9459953 (+) | True | LOC118966784 |
| TU8596 | other | upstream | 1848329 | 8255142 ~ 8255878 (+) | True | LOC110505168 |
| TU8580 | other | upstream | 1873972 | 8229297 ~ 8230235 (+) | True | LOC110501328 |
| TU10501 | other | downstream | 33356 | 10141244 ~ 10161286 (+) | True | gipc3 |
| TU11995 | other | downstream | 1368776 | 11476664 ~ 11514382 (+) | True | LOC110523899 |
| TU14216 | other | downstream | 3130725 | 13238613 ~ 13259996 (+) | True | LOC110538561 |
| TU14679 | other | downstream | 3520975 | 13628863 ~ 13631288 (+) | False | G12410 |
| TU14688 | other | downstream | 3522148 | 13630036 ~ 13631890 (+) | False | G12410 |
