Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU3889 |
| length | 397 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G2990 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 3931650 ~ 3933618 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU3874 | lncRNA | upstream | 25378 | 3896588 ~ 3906272 (+) | True | G2979 |
| TU3871 | lncRNA | upstream | 37182 | 3894091 ~ 3894468 (+) | True | G2978 |
| TU3862 | lncRNA | upstream | 49671 | 3880895 ~ 3881979 (+) | True | G2971 |
| TU3848 | lncRNA | upstream | 60571 | 3867865 ~ 3871079 (+) | False | G2963 |
| TU3892 | lncRNA | downstream | 4175 | 3937793 ~ 3938145 (+) | True | G2992 |
| TU3904 | lncRNA | downstream | 27616 | 3961234 ~ 3962364 (+) | True | G3002 |
| TU3917 | lncRNA | downstream | 46060 | 3979678 ~ 3982265 (+) | True | G3012 |
| TU3949 | lncRNA | downstream | 103994 | 4037612 ~ 4040640 (+) | True | G3032 |
| TU3950 | lncRNA | downstream | 109255 | 4042873 ~ 4043357 (+) | True | G3033 |
| XM_021616297.2 | mRNA | upstream | 78641 | 3848517 ~ 3853009 (+) | True | im:7152348 |
| trnap-ugg | mRNA | upstream | 83691 | 3847888 ~ 3847959 (+) | True | trnap-ugg |
| trnap-cgg | mRNA | upstream | 83956 | 3847623 ~ 3847694 (+) | True | trnap-cgg |
| XR_005052490.1 | mRNA | upstream | 105785 | 3823136 ~ 3825865 (+) | False | LOC118965227 |
| XM_036981292.1 | mRNA | upstream | 307068 | 3602663 ~ 3624582 (+) | True | bcl6aa |
| XM_036983882.1 | mRNA | downstream | 1015109 | 4948727 ~ 4957086 (+) | False | agxta |
| XM_036983911.1 | mRNA | downstream | 1015773 | 4949391 ~ 4957086 (+) | True | agxta |
| XM_036984367.1 | mRNA | downstream | 1730553 | 5664171 ~ 5767693 (+) | False | LOC110526525 |
| XM_036984422.1 | mRNA | downstream | 1730553 | 5664171 ~ 5767693 (+) | False | LOC110526525 |
| XM_036984452.1 | mRNA | downstream | 1730553 | 5664171 ~ 5767693 (+) | False | LOC110526525 |
| TU3203 | other | upstream | 428069 | 3503269 ~ 3503581 (+) | True | G2464 |
| TU3048 | other | upstream | 715416 | 3214697 ~ 3216234 (+) | True | G2343 |
| TU2640 | other | upstream | 1286481 | 2644335 ~ 2645169 (+) | True | G2016 |
| TU1265 | other | upstream | 1668085 | 2258883 ~ 2263565 (+) | False | G998 |
| TU4120 | other | downstream | 241705 | 4175323 ~ 4178073 (+) | True | G3176 |
| TU4195 | other | downstream | 465286 | 4398904 ~ 4399444 (+) | True | G3234 |
| TU4331 | other | downstream | 506348 | 4439966 ~ 4441908 (+) | True | G3351 |
| TU4683 | other | downstream | 920903 | 4854521 ~ 4856248 (+) | True | G3596 |
| TU4684 | other | downstream | 922907 | 4856525 ~ 4857065 (+) | True | G3597 |
