Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU4338 |
| length | 270 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G3357 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 4450860 ~ 4451777 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU4190 | lncRNA | upstream | 15376 | 4357439 ~ 4435484 (+) | True | G3232 |
| TU4166 | lncRNA | upstream | 160001 | 4289767 ~ 4290859 (+) | True | G3211 |
| TU4160 | lncRNA | upstream | 168444 | 4281407 ~ 4282416 (+) | True | G3205 |
| TU4159 | lncRNA | upstream | 171229 | 4279406 ~ 4279631 (+) | True | G3204 |
| TU4157 | lncRNA | upstream | 173420 | 4277168 ~ 4277440 (+) | True | G3202 |
| TU4364 | lncRNA | downstream | 30946 | 4482723 ~ 4489920 (+) | False | G3375 |
| TU4368 | lncRNA | downstream | 30946 | 4482723 ~ 4487440 (+) | True | G3375 |
| TU4372 | lncRNA | downstream | 38215 | 4489992 ~ 4498191 (+) | True | G3377 |
| TU4418 | lncRNA | downstream | 136879 | 4588656 ~ 4626800 (+) | True | G3416 |
| TU4419 | lncRNA | downstream | 140908 | 4592685 ~ 4593589 (+) | True | G3417 |
| XM_021616297.2 | mRNA | upstream | 597851 | 3848517 ~ 3853009 (+) | True | im:7152348 |
| trnap-ugg | mRNA | upstream | 602901 | 3847888 ~ 3847959 (+) | True | trnap-ugg |
| trnap-cgg | mRNA | upstream | 603166 | 3847623 ~ 3847694 (+) | True | trnap-cgg |
| XR_005052490.1 | mRNA | upstream | 624995 | 3823136 ~ 3825865 (+) | False | LOC118965227 |
| XM_036981292.1 | mRNA | upstream | 826278 | 3602663 ~ 3624582 (+) | True | bcl6aa |
| XM_036983882.1 | mRNA | downstream | 496950 | 4948727 ~ 4957086 (+) | False | agxta |
| XM_036983911.1 | mRNA | downstream | 497614 | 4949391 ~ 4957086 (+) | True | agxta |
| XM_036984367.1 | mRNA | downstream | 1212394 | 5664171 ~ 5767693 (+) | False | LOC110526525 |
| XM_036984422.1 | mRNA | downstream | 1212394 | 5664171 ~ 5767693 (+) | False | LOC110526525 |
| XM_036984452.1 | mRNA | downstream | 1212394 | 5664171 ~ 5767693 (+) | False | LOC110526525 |
| TU4331 | other | upstream | 8952 | 4439966 ~ 4441908 (+) | True | G3351 |
| TU4195 | other | upstream | 51416 | 4398904 ~ 4399444 (+) | True | G3234 |
| TU4120 | other | upstream | 272787 | 4175323 ~ 4178073 (+) | True | G3176 |
| TU3203 | other | upstream | 947279 | 3503269 ~ 3503581 (+) | True | G2464 |
| TU3048 | other | upstream | 1234626 | 3214697 ~ 3216234 (+) | True | G2343 |
| TU4683 | other | downstream | 402744 | 4854521 ~ 4856248 (+) | True | G3596 |
| TU4684 | other | downstream | 404748 | 4856525 ~ 4857065 (+) | True | G3597 |
| TU6645 | other | downstream | 2065705 | 6517482 ~ 6518189 (+) | True | G5276 |
| TU6993 | other | downstream | 2359217 | 6810994 ~ 6811621 (+) | True | G5581 |
| TU7952 | other | downstream | 3273269 | 7725046 ~ 7725609 (+) | True | G6434 |
