RNA id: TU6760



Basic Information


Item Value
RNA id TU6760
length 263
lncRNA type antisense_over
GC content 0.41
exon number 3
gene id G5366
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 6748327 ~ 6748866 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AGGTGTGGCTTTGGCTGGGGTCTTTTTGGGTGGGGGGGCCTCCTCCTCAGACTCTTCCTCAGAGTCATCGTCCTCTTCACTTTCTGCTTTTTTTGCTGCTTTCCCATTCTTAGCTGCTTTCGGTGCTGGCTTGGCTGGTGTGACAGCCTTCTTTGCTACTGCTTTTGGTGGAGCctcttcctcctcatcgcTTTCTTCTTCGCTGGATTCCTCTTCCACCTCTTTAGGAGGTGGTGGGGCCTTTTTCTTGGGGTTAGCTTGTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU6757 lncRNA upstream 695 6742471 ~ 6747632 (+) True G5365
TU6676 lncRNA upstream 96560 6650165 ~ 6651767 (+) True LOC110527749
TU6710 lncRNA upstream 118548 6626354 ~ 6629779 (+) False G5324
TU6713 lncRNA upstream 118548 6628716 ~ 6629779 (+) True G5324
TU6711 lncRNA upstream 120981 6623804 ~ 6627346 (+) False G5324
TU6979 lncRNA downstream 43890 6792756 ~ 6809277 (+) True G5567
TU6992 lncRNA downstream 61178 6810044 ~ 6810274 (+) True G5580
TU6995 lncRNA downstream 63642 6812508 ~ 6812775 (+) True G5583
TU7084 lncRNA downstream 137396 6886262 ~ 6886485 (+) True G5669
TU7123 lncRNA downstream 167586 6916452 ~ 6916713 (+) True G5705
XM_021609413.2 mRNA upstream 48023 6684099 ~ 6700304 (+) True b3gnt7
XR_005052837.1 mRNA upstream 96532 6559067 ~ 6651795 (+) False LOC110527749
XM_036985429.1 mRNA downstream 279684 7028550 ~ 7056518 (+) True alpi.1
XM_021610103.2 mRNA downstream 315502 7064368 ~ 7093597 (+) False alpi.2
XM_021610191.2 mRNA downstream 315502 7064368 ~ 7094220 (+) True alpi.2
XM_021610318.2 mRNA downstream 347433 7096299 ~ 7107509 (+) False ankle1
XM_036985646.1 mRNA downstream 347433 7096299 ~ 7107509 (+) False ankle1
TU6645 other upstream 230138 6517482 ~ 6518189 (+) True G5276
TU4684 other upstream 1891262 4856525 ~ 4857065 (+) True G3597
TU4683 other upstream 1892079 4854521 ~ 4856248 (+) True G3596
TU4331 other upstream 2306419 4439966 ~ 4441908 (+) True G3351
TU4195 other upstream 2348883 4398904 ~ 4399444 (+) True G3234
TU6993 other downstream 62128 6810994 ~ 6811621 (+) True G5581
TU7952 other downstream 976180 7725046 ~ 7725609 (+) True G6434
TU8049 other downstream 1136525 7885391 ~ 7885907 (+) True G6518
TU8398 other downstream 1287751 8036617 ~ 8037154 (+) True G6807
TU8580 other downstream 1480431 8229297 ~ 8230235 (+) True LOC110501328

Expression Profile