Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU9478 |
| length | 242 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G7740 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 9130604 ~ 9130845 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU9312 | lncRNA | upstream | 253077 | 8874781 ~ 8877527 (+) | True | G7581 |
| TU9300 | lncRNA | upstream | 265427 | 8864181 ~ 8865177 (+) | True | G7573 |
| TU9164 | lncRNA | upstream | 299224 | 8799490 ~ 8831380 (+) | True | LOC118966103 |
| TU9139 | lncRNA | upstream | 322438 | 8756471 ~ 8808166 (+) | True | G7436 |
| TU9143 | lncRNA | upstream | 333240 | 8768524 ~ 8797364 (+) | True | G7440 |
| TU9495 | lncRNA | downstream | 22693 | 9153538 ~ 9153843 (+) | True | G7757 |
| TU9514 | lncRNA | downstream | 64510 | 9195355 ~ 9195727 (+) | True | G7776 |
| TU9523 | lncRNA | downstream | 86374 | 9217219 ~ 9218494 (+) | True | G7780 |
| TU9803 | lncRNA | downstream | 100681 | 9231526 ~ 9231756 (+) | True | G8000 |
| TU9812 | lncRNA | downstream | 107159 | 9238004 ~ 9238233 (+) | True | G8009 |
| XM_036989225.1 | mRNA | upstream | 215204 | 8877591 ~ 8915400 (+) | False | usp13 |
| XM_036989170.1 | mRNA | upstream | 215204 | 8877593 ~ 8915400 (+) | False | usp13 |
| XM_036989273.1 | mRNA | upstream | 215204 | 8878419 ~ 8915400 (+) | True | usp13 |
| XM_021615003.2 | mRNA | upstream | 259320 | 8868110 ~ 8871284 (+) | True | ndufb5 |
| LOC118966103 | mRNA | upstream | 279232 | 8799458 ~ 8851372 (+) | False | LOC118966103 |
| XM_021614466.2 | mRNA | downstream | 41123 | 9171968 ~ 9183082 (+) | False | LOC110531220 |
| XM_036989375.1 | mRNA | downstream | 41123 | 9171968 ~ 9183082 (+) | False | LOC110531220 |
| XM_036989433.1 | mRNA | downstream | 41123 | 9171968 ~ 9183082 (+) | True | LOC110531220 |
| XM_021614393.2 | mRNA | downstream | 87813 | 9218658 ~ 9221408 (+) | True | LOC110531147 |
| XM_021614129.2 | mRNA | downstream | 109274 | 9240119 ~ 9300065 (+) | False | psmd1 |
| TU8596 | other | upstream | 874726 | 8255142 ~ 8255878 (+) | True | LOC110505168 |
| TU8580 | other | upstream | 900369 | 8229297 ~ 8230235 (+) | True | LOC110501328 |
| TU8398 | other | upstream | 1093450 | 8036617 ~ 8037154 (+) | True | G6807 |
| TU8049 | other | upstream | 1244697 | 7885391 ~ 7885907 (+) | True | G6518 |
| TU7952 | other | upstream | 1404995 | 7725046 ~ 7725609 (+) | True | G6434 |
| TU9946 | other | downstream | 328103 | 9458948 ~ 9459953 (+) | True | LOC118966784 |
| TU10089 | other | downstream | 852930 | 9983775 ~ 9984464 (+) | False | LOC110510920 |
| TU9934 | other | downstream | 854537 | 9985382 ~ 9991542 (+) | True | LOC110510920 |
| TU10501 | other | downstream | 1010399 | 10141244 ~ 10161286 (+) | True | gipc3 |
| TU11995 | other | downstream | 2345819 | 11476664 ~ 11514382 (+) | True | LOC110523899 |
