Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU9812 |
| length | 230 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G8009 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 9238004 ~ 9238233 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU9803 | lncRNA | upstream | 6248 | 9231526 ~ 9231756 (+) | True | G8000 |
| TU9523 | lncRNA | upstream | 19510 | 9217219 ~ 9218494 (+) | True | G7780 |
| TU9514 | lncRNA | upstream | 42277 | 9195355 ~ 9195727 (+) | True | G7776 |
| TU9495 | lncRNA | upstream | 84161 | 9153538 ~ 9153843 (+) | True | G7757 |
| TU9478 | lncRNA | upstream | 107159 | 9130604 ~ 9130845 (+) | True | G7740 |
| TU9835 | lncRNA | downstream | 64859 | 9303092 ~ 9303588 (+) | True | G8030 |
| TU9836 | lncRNA | downstream | 65729 | 9303962 ~ 9304110 (+) | True | G8031 |
| TU9838 | lncRNA | downstream | 74182 | 9312415 ~ 9315424 (+) | False | G8032 |
| TU9839 | lncRNA | downstream | 74182 | 9312415 ~ 9315424 (+) | False | G8032 |
| TU9840 | lncRNA | downstream | 74182 | 9312415 ~ 9315424 (+) | True | G8032 |
| XM_021614393.2 | mRNA | upstream | 16596 | 9218658 ~ 9221408 (+) | True | LOC110531147 |
| XM_021614466.2 | mRNA | upstream | 54922 | 9171968 ~ 9183082 (+) | False | LOC110531220 |
| XM_036989375.1 | mRNA | upstream | 54922 | 9171968 ~ 9183082 (+) | False | LOC110531220 |
| XM_036989433.1 | mRNA | upstream | 54922 | 9171968 ~ 9183082 (+) | True | LOC110531220 |
| XM_036989273.1 | mRNA | upstream | 322604 | 8878419 ~ 8915400 (+) | True | usp13 |
| XM_021614129.2 | mRNA | downstream | 1886 | 9240119 ~ 9300065 (+) | False | psmd1 |
| XM_021614202.2 | mRNA | downstream | 1886 | 9240119 ~ 9300065 (+) | False | psmd1 |
| XM_021614254.2 | mRNA | downstream | 1886 | 9240119 ~ 9300065 (+) | True | psmd1 |
| XM_036990199.1 | mRNA | downstream | 190284 | 9428517 ~ 9436879 (+) | False | LOC118966743 |
| XM_036990336.1 | mRNA | downstream | 190924 | 9429157 ~ 9431792 (+) | False | LOC118966743 |
| TU8596 | other | upstream | 982126 | 8255142 ~ 8255878 (+) | True | LOC110505168 |
| TU8580 | other | upstream | 1007769 | 8229297 ~ 8230235 (+) | True | LOC110501328 |
| TU8398 | other | upstream | 1200850 | 8036617 ~ 8037154 (+) | True | G6807 |
| TU8049 | other | upstream | 1352097 | 7885391 ~ 7885907 (+) | True | G6518 |
| TU7952 | other | upstream | 1512395 | 7725046 ~ 7725609 (+) | True | G6434 |
| TU9946 | other | downstream | 220715 | 9458948 ~ 9459953 (+) | True | LOC118966784 |
| TU10089 | other | downstream | 745542 | 9983775 ~ 9984464 (+) | False | LOC110510920 |
| TU9934 | other | downstream | 747149 | 9985382 ~ 9991542 (+) | True | LOC110510920 |
| TU10501 | other | downstream | 903011 | 10141244 ~ 10161286 (+) | True | gipc3 |
| TU11995 | other | downstream | 2238431 | 11476664 ~ 11514382 (+) | True | LOC110523899 |
