Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU12441 |
| length | 918 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 2 |
| gene id | G10428 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 11798256 ~ 11799236 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU12445 | lncRNA | upstream | 294 | 11797021 ~ 11797962 (+) | True | G10431 |
| TU12469 | lncRNA | upstream | 7796 | 11790166 ~ 11790460 (+) | True | G10455 |
| TU12466 | lncRNA | upstream | 9508 | 11788440 ~ 11788748 (+) | True | G10452 |
| TU12460 | lncRNA | upstream | 20696 | 11777210 ~ 11777560 (+) | True | G10446 |
| TU12455 | lncRNA | upstream | 29137 | 11768812 ~ 11769119 (+) | True | G10441 |
| TU12517 | lncRNA | downstream | 54398 | 11853634 ~ 11853865 (+) | True | G10500 |
| TU12483 | lncRNA | downstream | 76585 | 11875821 ~ 11877997 (+) | False | ccdc50 |
| TU12480 | lncRNA | downstream | 78893 | 11878129 ~ 11879264 (+) | False | ccdc50 |
| TU12481 | lncRNA | downstream | 78988 | 11878224 ~ 11879264 (+) | True | ccdc50 |
| TU12523 | lncRNA | downstream | 84041 | 11883277 ~ 11884400 (+) | True | G10506 |
| XM_021618773.1 | mRNA | upstream | 131564 | 11664608 ~ 11666692 (+) | True | LOC110534079 |
| XM_036940953.1 | mRNA | upstream | 283829 | 11433108 ~ 11514427 (+) | False | LOC110523899 |
| XM_036941002.1 | mRNA | upstream | 283829 | 11433109 ~ 11514427 (+) | False | LOC110523899 |
| XM_036940803.1 | mRNA | upstream | 305767 | 11433103 ~ 11492489 (+) | False | LOC110523899 |
| XM_036941304.1 | mRNA | downstream | 46483 | 11845719 ~ 11872791 (+) | False | ccdc50 |
| XM_036941268.1 | mRNA | downstream | 46483 | 11845719 ~ 11872796 (+) | False | ccdc50 |
| XM_036941195.1 | mRNA | downstream | 46485 | 11845721 ~ 11879266 (+) | False | ccdc50 |
| XM_036941231.1 | mRNA | downstream | 46486 | 11845722 ~ 11879266 (+) | False | ccdc50 |
| XM_036941343.1 | mRNA | downstream | 46493 | 11845729 ~ 11879266 (+) | False | ccdc50 |
| TU11995 | other | upstream | 283874 | 11476664 ~ 11514382 (+) | True | LOC110523899 |
| TU10501 | other | upstream | 1636970 | 10141244 ~ 10161286 (+) | True | gipc3 |
| TU9934 | other | upstream | 1806714 | 9985382 ~ 9991542 (+) | True | LOC110510920 |
| TU10089 | other | upstream | 1813792 | 9983775 ~ 9984464 (+) | False | LOC110510920 |
| TU9946 | other | upstream | 2338303 | 9458948 ~ 9459953 (+) | True | LOC118966784 |
| TU14216 | other | downstream | 1439377 | 13238613 ~ 13259996 (+) | True | LOC110538561 |
| TU14679 | other | downstream | 1829627 | 13628863 ~ 13631288 (+) | False | G12410 |
| TU14688 | other | downstream | 1830800 | 13630036 ~ 13631890 (+) | False | G12410 |
| TU15077 | other | downstream | 2393220 | 14192456 ~ 14208014 (+) | True | LOC110486057 |
| TU15838 | other | downstream | 2880114 | 14679350 ~ 14679578 (+) | True | G13380 |
