Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU12529 |
| length | 408 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G10509 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 11890172 ~ 11890579 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU12530 | lncRNA | upstream | 656 | 11889209 ~ 11889516 (+) | True | G10510 |
| TU12523 | lncRNA | upstream | 5772 | 11883277 ~ 11884400 (+) | True | G10506 |
| TU12480 | lncRNA | upstream | 10908 | 11878129 ~ 11879264 (+) | False | ccdc50 |
| TU12481 | lncRNA | upstream | 10908 | 11878224 ~ 11879264 (+) | True | ccdc50 |
| TU12483 | lncRNA | upstream | 12175 | 11875821 ~ 11877997 (+) | False | ccdc50 |
| TU12532 | lncRNA | downstream | 1836 | 11892415 ~ 11892777 (+) | True | G10512 |
| TU12540 | lncRNA | downstream | 9140 | 11899719 ~ 11900056 (+) | True | G10519 |
| TU12544 | lncRNA | downstream | 11155 | 11901734 ~ 11901964 (+) | True | G10521 |
| TU12644 | lncRNA | downstream | 145967 | 12036546 ~ 12098355 (+) | True | G10596 |
| TU12647 | lncRNA | downstream | 155563 | 12046142 ~ 12048908 (+) | True | G10598 |
| XM_036941195.1 | mRNA | upstream | 10906 | 11845721 ~ 11879266 (+) | False | ccdc50 |
| XM_036941231.1 | mRNA | upstream | 10906 | 11845722 ~ 11879266 (+) | False | ccdc50 |
| XM_036941343.1 | mRNA | upstream | 10906 | 11845729 ~ 11879266 (+) | False | ccdc50 |
| XM_036941268.1 | mRNA | upstream | 17376 | 11845719 ~ 11872796 (+) | False | ccdc50 |
| XM_036941304.1 | mRNA | upstream | 17381 | 11845719 ~ 11872791 (+) | False | ccdc50 |
| XM_021619544.2 | mRNA | downstream | 13112 | 11903691 ~ 11906713 (+) | True | LOC110534540 |
| XM_021619656.2 | mRNA | downstream | 31997 | 11922576 ~ 12025076 (+) | True | LOC110534688 |
| XM_021619755.2 | mRNA | downstream | 147146 | 12037725 ~ 12043817 (+) | True | cpox |
| XM_021619978.2 | mRNA | downstream | 166229 | 12056808 ~ 12072687 (+) | True | LOC110535080 |
| XM_021620082.2 | mRNA | downstream | 224507 | 12115086 ~ 12146128 (+) | False | LOC110535183 |
| TU11995 | other | upstream | 375790 | 11476664 ~ 11514382 (+) | True | LOC110523899 |
| TU10501 | other | upstream | 1728886 | 10141244 ~ 10161286 (+) | True | gipc3 |
| TU9934 | other | upstream | 1898630 | 9985382 ~ 9991542 (+) | True | LOC110510920 |
| TU10089 | other | upstream | 1905708 | 9983775 ~ 9984464 (+) | False | LOC110510920 |
| TU9946 | other | upstream | 2430219 | 9458948 ~ 9459953 (+) | True | LOC118966784 |
| TU14216 | other | downstream | 1348034 | 13238613 ~ 13259996 (+) | True | LOC110538561 |
| TU14679 | other | downstream | 1738284 | 13628863 ~ 13631288 (+) | False | G12410 |
| TU14688 | other | downstream | 1739457 | 13630036 ~ 13631890 (+) | False | G12410 |
| TU15077 | other | downstream | 2301877 | 14192456 ~ 14208014 (+) | True | LOC110486057 |
| TU15838 | other | downstream | 2788771 | 14679350 ~ 14679578 (+) | True | G13380 |
