Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU13204 |
| length | 216 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G11101 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 12357927 ~ 12358142 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU13202 | lncRNA | upstream | 2797 | 12354912 ~ 12355130 (+) | True | G11099 |
| TU13192 | lncRNA | upstream | 15641 | 12342007 ~ 12342286 (+) | True | G11089 |
| TU13111 | lncRNA | upstream | 39737 | 12312723 ~ 12318190 (+) | True | G11015 |
| TU12755 | lncRNA | upstream | 140342 | 12217356 ~ 12217585 (+) | True | G10692 |
| TU12753 | lncRNA | upstream | 144642 | 12211743 ~ 12213285 (+) | True | G10691 |
| TU13205 | lncRNA | downstream | 389 | 12358531 ~ 12358851 (+) | True | G11102 |
| TU13206 | lncRNA | downstream | 1085 | 12359227 ~ 12359453 (+) | True | G11103 |
| TU13230 | lncRNA | downstream | 52455 | 12410597 ~ 12410836 (+) | True | G11127 |
| TU13233 | lncRNA | downstream | 57169 | 12415311 ~ 12416032 (+) | True | G11130 |
| TU13240 | lncRNA | downstream | 75322 | 12433464 ~ 12434513 (+) | True | G11137 |
| XM_036989306.1 | mRNA | upstream | 45288 | 12257968 ~ 12312639 (+) | True | LOC110525067 |
| LOC110535487 | mRNA | upstream | 104396 | 12250169 ~ 12253531 (+) | True | LOC110535487 |
| XM_036942469.1 | mRNA | upstream | 192755 | 12154422 ~ 12165172 (+) | False | mindy4 |
| XM_036942437.1 | mRNA | upstream | 192755 | 12154424 ~ 12165172 (+) | True | mindy4 |
| XM_021620159.2 | mRNA | upstream | 211799 | 12118830 ~ 12146128 (+) | True | LOC110535183 |
| XM_021621168.2 | mRNA | downstream | 103225 | 12461367 ~ 12473058 (+) | False | armh1 |
| XM_021621329.2 | mRNA | downstream | 103225 | 12461367 ~ 12473058 (+) | False | armh1 |
| XM_036943199.1 | mRNA | downstream | 126544 | 12484686 ~ 12496762 (+) | False | LOC110536107 |
| XM_021621786.2 | mRNA | downstream | 127496 | 12485638 ~ 12496762 (+) | False | LOC110536107 |
| XM_036943345.1 | mRNA | downstream | 127574 | 12485716 ~ 12496762 (+) | False | LOC110536107 |
| TU11995 | other | upstream | 843545 | 11476664 ~ 11514382 (+) | True | LOC110523899 |
| TU10501 | other | upstream | 2196641 | 10141244 ~ 10161286 (+) | True | gipc3 |
| TU9934 | other | upstream | 2366385 | 9985382 ~ 9991542 (+) | True | LOC110510920 |
| TU10089 | other | upstream | 2373463 | 9983775 ~ 9984464 (+) | False | LOC110510920 |
| TU9946 | other | upstream | 2897974 | 9458948 ~ 9459953 (+) | True | LOC118966784 |
| TU14216 | other | downstream | 880471 | 13238613 ~ 13259996 (+) | True | LOC110538561 |
| TU14679 | other | downstream | 1270721 | 13628863 ~ 13631288 (+) | False | G12410 |
| TU14688 | other | downstream | 1271894 | 13630036 ~ 13631890 (+) | False | G12410 |
| TU15077 | other | downstream | 1834314 | 14192456 ~ 14208014 (+) | True | LOC110486057 |
| TU15838 | other | downstream | 2321208 | 14679350 ~ 14679578 (+) | True | G13380 |
