Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU13666 |
| length | 216 |
| lncRNA type | intronic |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G11539 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 13043835 ~ 13044050 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU13617 | lncRNA | upstream | 41471 | 12962560 ~ 13002364 (+) | True | G11494 |
| TU13626 | lncRNA | upstream | 45246 | 12973692 ~ 12998589 (+) | True | G11500 |
| TU13598 | lncRNA | upstream | 104816 | 12938813 ~ 12939019 (+) | True | G11475 |
| TU13543 | lncRNA | upstream | 173649 | 12869398 ~ 12870186 (+) | True | G11422 |
| TU13258 | lncRNA | upstream | 577503 | 12460957 ~ 12466332 (+) | True | armh1 |
| TU13702 | lncRNA | downstream | 107954 | 13152004 ~ 13152991 (+) | True | G11574 |
| TU13715 | lncRNA | downstream | 137762 | 13181812 ~ 13182548 (+) | True | G11586 |
| TU14193 | lncRNA | downstream | 166414 | 13210464 ~ 13210813 (+) | True | G11999 |
| TU14194 | lncRNA | downstream | 167058 | 13211108 ~ 13211689 (+) | True | G12000 |
| TU14196 | lncRNA | downstream | 177331 | 13221381 ~ 13222041 (+) | False | LOC110526761 |
| XM_021623210.2 | mRNA | upstream | 27632 | 13011539 ~ 13016203 (+) | True | ptgfr |
| XM_036944295.1 | mRNA | upstream | 109223 | 12895414 ~ 12934612 (+) | True | LOC110537039 |
| XM_021622671.2 | mRNA | upstream | 241692 | 12790207 ~ 12802143 (+) | True | LOC110536960 |
| XM_021622505.2 | mRNA | upstream | 278338 | 12702673 ~ 12765497 (+) | False | LOC110536795 |
| XM_021624077.2 | mRNA | downstream | 745 | 13044795 ~ 13047924 (+) | True | btf3l4 |
| XM_021623414.2 | mRNA | downstream | 4391 | 13048441 ~ 13060443 (+) | False | zfyve9b |
| XM_036944473.1 | mRNA | downstream | 4391 | 13048441 ~ 13060832 (+) | False | zfyve9b |
| XM_021623738.2 | mRNA | downstream | 4392 | 13048442 ~ 13060187 (+) | False | zfyve9b |
| XM_021623534.2 | mRNA | downstream | 4392 | 13048442 ~ 13060594 (+) | False | zfyve9b |
| TU11995 | other | upstream | 1529453 | 11476664 ~ 11514382 (+) | True | LOC110523899 |
| TU10501 | other | upstream | 2882549 | 10141244 ~ 10161286 (+) | True | gipc3 |
| TU9934 | other | upstream | 3052293 | 9985382 ~ 9991542 (+) | True | LOC110510920 |
| TU10089 | other | upstream | 3059371 | 9983775 ~ 9984464 (+) | False | LOC110510920 |
| TU9946 | other | upstream | 3583882 | 9458948 ~ 9459953 (+) | True | LOC118966784 |
| TU14216 | other | downstream | 194563 | 13238613 ~ 13259996 (+) | True | LOC110538561 |
| TU14679 | other | downstream | 584813 | 13628863 ~ 13631288 (+) | False | G12410 |
| TU14688 | other | downstream | 585986 | 13630036 ~ 13631890 (+) | False | G12410 |
| TU15077 | other | downstream | 1148406 | 14192456 ~ 14208014 (+) | True | LOC110486057 |
| TU15838 | other | downstream | 1635300 | 14679350 ~ 14679578 (+) | True | G13380 |
