Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU17532 |
| length | 227 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G14888 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 16087969 ~ 16097568 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU17497 | lncRNA | upstream | 43894 | 16043382 ~ 16044075 (+) | True | G14858 |
| TU17030 | lncRNA | upstream | 449923 | 15637580 ~ 15638046 (+) | True | G14427 |
| TU17020 | lncRNA | upstream | 472132 | 15615571 ~ 15615837 (+) | True | G14418 |
| TU17019 | lncRNA | upstream | 472452 | 15615305 ~ 15615517 (+) | True | G14417 |
| TU17017 | lncRNA | upstream | 476335 | 15611073 ~ 15611634 (+) | True | G14415 |
| TU17543 | lncRNA | downstream | 17245 | 16114813 ~ 16124751 (+) | True | G14897 |
| TU17578 | lncRNA | downstream | 87649 | 16185217 ~ 16185549 (+) | True | G14932 |
| TU17655 | lncRNA | downstream | 211299 | 16308867 ~ 16326251 (+) | True | G15008 |
| TU17974 | lncRNA | downstream | 262933 | 16360501 ~ 16360854 (+) | True | G15304 |
| TU17996 | lncRNA | downstream | 276754 | 16374322 ~ 16374783 (+) | True | G15326 |
| XM_021564067.2 | mRNA | upstream | 112113 | 15922503 ~ 15975856 (+) | True | LOC110490588 |
| XM_021564309.2 | mRNA | upstream | 165884 | 15920501 ~ 15922085 (+) | True | cart1 |
| XM_021564171.2 | mRNA | upstream | 168045 | 15911133 ~ 15919924 (+) | False | LOC110490675 |
| XM_021564225.2 | mRNA | upstream | 168045 | 15911133 ~ 15919924 (+) | True | LOC110490675 |
| XM_021563971.2 | mRNA | upstream | 371195 | 15694810 ~ 15716774 (+) | False | LOC110490510 |
| XM_036952967.1 | mRNA | downstream | 60364 | 16157932 ~ 16176681 (+) | False | LOC110491417 |
| XM_036952860.1 | mRNA | downstream | 60369 | 16157937 ~ 16180982 (+) | False | LOC110491417 |
| XM_036952900.1 | mRNA | downstream | 60369 | 16157937 ~ 16180982 (+) | False | LOC110491417 |
| XM_036952929.1 | mRNA | downstream | 70814 | 16168382 ~ 16180982 (+) | True | LOC110491417 |
| XM_036953308.1 | mRNA | downstream | 382412 | 16479980 ~ 16488940 (+) | False | LOC110491555 |
| TU17062 | other | upstream | 372287 | 15695041 ~ 15715682 (+) | True | LOC110490510 |
| TU16507 | other | upstream | 619981 | 15459904 ~ 15467988 (+) | True | sass6 |
| TU16116 | other | upstream | 1125966 | 14961554 ~ 14962003 (+) | True | G13639 |
| TU15897 | other | upstream | 1275345 | 14811771 ~ 14812624 (+) | True | G13434 |
| TU15850 | other | upstream | 1387239 | 14700176 ~ 14700730 (+) | True | G13391 |
| TU18087 | other | downstream | 481518 | 16579086 ~ 16580882 (+) | True | LOC118941201 |
| TU18393 | other | downstream | 818931 | 16916499 ~ 16920409 (+) | True | LOC110492606 |
| TU18429 | other | downstream | 865489 | 16963057 ~ 16967790 (+) | True | LOC110492876 |
| TU19135 | other | downstream | 1556639 | 17654207 ~ 17665008 (+) | False | LOC110495874 |
| TU19716 | other | downstream | 1878396 | 17975964 ~ 17991176 (+) | True | ccdc124 |
