Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU123607 |
| length | 973 |
| lncRNA type | intronic |
| GC content | 0.39 |
| exon number | 3 |
| gene id | G108698 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 5775907 ~ 5779231 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU123582 | lncRNA | upstream | 531 | 5733615 ~ 5775376 (+) | True | G108685 |
| TU123605 | lncRNA | upstream | 1199 | 5774380 ~ 5774708 (+) | True | G108697 |
| TU123593 | lncRNA | upstream | 6840 | 5767946 ~ 5769067 (+) | True | G108694 |
| TU123520 | lncRNA | upstream | 14987 | 5758602 ~ 5760920 (+) | True | G108644 |
| TU123519 | lncRNA | upstream | 17954 | 5757004 ~ 5757953 (+) | True | G108643 |
| TU123615 | lncRNA | downstream | 983 | 5780214 ~ 5782921 (+) | False | G108702 |
| TU123621 | lncRNA | downstream | 24855 | 5804086 ~ 5805042 (+) | False | G108707 |
| TU123622 | lncRNA | downstream | 24855 | 5804086 ~ 5804551 (+) | True | G108707 |
| TU123624 | lncRNA | downstream | 27190 | 5806421 ~ 5806940 (+) | True | G108709 |
| TU123629 | lncRNA | downstream | 54425 | 5833656 ~ 5834519 (+) | True | G108712 |
| XM_036935962.1 | mRNA | upstream | 22060 | 5616004 ~ 5753847 (+) | False | jarid2a |
| XM_036935963.1 | mRNA | upstream | 22060 | 5616004 ~ 5753847 (+) | True | jarid2a |
| XR_005034689.1 | mRNA | upstream | 27811 | 5615996 ~ 5748096 (+) | False | jarid2a |
| XM_036935845.1 | mRNA | upstream | 183654 | 5575379 ~ 5592253 (+) | False | LOC110506279 |
| XM_036935966.1 | mRNA | downstream | 33016 | 5812247 ~ 5839646 (+) | True | mylipb |
| XM_036936009.1 | mRNA | downstream | 62286 | 5841517 ~ 5854174 (+) | False | LOC110505528 |
| XM_036936052.1 | mRNA | downstream | 174750 | 5953981 ~ 5955445 (+) | False | LOC110505637 |
| XR_005034712.1 | mRNA | downstream | 196969 | 5976200 ~ 6002265 (+) | False | LOC110505679 |
| XR_005034714.1 | mRNA | downstream | 199035 | 5978266 ~ 5979890 (+) | True | LOC118937375 |
| TU123575 | other | upstream | 50328 | 5719965 ~ 5725579 (+) | False | G108682 |
| TU123579 | other | upstream | 50525 | 5719965 ~ 5725382 (+) | True | G108682 |
| TU123443 | other | upstream | 193457 | 5581293 ~ 5582450 (+) | True | LOC110506279 |
| TU123438 | other | upstream | 233042 | 5506546 ~ 5542865 (+) | True | ptp4a3b |
| TU123151 | other | upstream | 475974 | 5296179 ~ 5299933 (+) | True | G108354 |
| TU123616 | other | downstream | 983 | 5780214 ~ 5782644 (+) | True | G108702 |
| TU123653 | other | downstream | 121280 | 5900511 ~ 5900950 (+) | True | G108733 |
| TU123496 | other | downstream | 174655 | 5953886 ~ 5958769 (+) | False | LOC110505637 |
| TU123500 | other | downstream | 174655 | 5953886 ~ 5958813 (+) | False | LOC110505637 |
| TU123491 | other | downstream | 174714 | 5953945 ~ 5958769 (+) | False | LOC110505637 |
