Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU123648 |
| length | 252 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G108728 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 5895808 ~ 5896059 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU123643 | lncRNA | upstream | 9336 | 5886260 ~ 5886472 (+) | True | G108723 |
| TU123523 | lncRNA | upstream | 10675 | 5883094 ~ 5885133 (+) | True | G108647 |
| TU123506 | lncRNA | upstream | 13772 | 5881143 ~ 5882036 (+) | True | G108630 |
| TU123642 | lncRNA | upstream | 15342 | 5879937 ~ 5880466 (+) | True | G108722 |
| TU123522 | lncRNA | upstream | 40025 | 5855255 ~ 5855783 (+) | True | G108646 |
| TU123650 | lncRNA | downstream | 2316 | 5898375 ~ 5898791 (+) | True | G108730 |
| TU123651 | lncRNA | downstream | 3665 | 5899724 ~ 5900018 (+) | True | G108731 |
| TU123656 | lncRNA | downstream | 15629 | 5911688 ~ 5911936 (+) | True | G108736 |
| TU123672 | lncRNA | downstream | 44946 | 5941005 ~ 5941256 (+) | True | G108752 |
| TU123683 | lncRNA | downstream | 47693 | 5943752 ~ 5944991 (+) | True | G108753 |
| XM_036936009.1 | mRNA | upstream | 41634 | 5841517 ~ 5854174 (+) | False | LOC110505528 |
| XM_036935966.1 | mRNA | upstream | 56162 | 5812247 ~ 5839646 (+) | True | mylipb |
| XM_036935962.1 | mRNA | upstream | 141961 | 5616004 ~ 5753847 (+) | False | jarid2a |
| XM_036935963.1 | mRNA | upstream | 141961 | 5616004 ~ 5753847 (+) | True | jarid2a |
| XR_005034689.1 | mRNA | upstream | 147712 | 5615996 ~ 5748096 (+) | False | jarid2a |
| XM_036936052.1 | mRNA | downstream | 57922 | 5953981 ~ 5955445 (+) | False | LOC110505637 |
| XR_005034712.1 | mRNA | downstream | 80141 | 5976200 ~ 6002265 (+) | False | LOC110505679 |
| XR_005034714.1 | mRNA | downstream | 82207 | 5978266 ~ 5979890 (+) | True | LOC118937375 |
| XR_005034713.1 | mRNA | downstream | 102871 | 5998930 ~ 6002265 (+) | False | LOC110505679 |
| XR_005034711.1 | mRNA | downstream | 105163 | 6001222 ~ 6002265 (+) | False | LOC110505679 |
| TU123616 | other | upstream | 113164 | 5780214 ~ 5782644 (+) | True | G108702 |
| TU123575 | other | upstream | 170229 | 5719965 ~ 5725579 (+) | False | G108682 |
| TU123579 | other | upstream | 170426 | 5719965 ~ 5725382 (+) | True | G108682 |
| TU123443 | other | upstream | 313358 | 5581293 ~ 5582450 (+) | True | LOC110506279 |
| TU123438 | other | upstream | 352943 | 5506546 ~ 5542865 (+) | True | ptp4a3b |
| TU123653 | other | downstream | 4452 | 5900511 ~ 5900950 (+) | True | G108733 |
| TU123496 | other | downstream | 57827 | 5953886 ~ 5958769 (+) | False | LOC110505637 |
| TU123500 | other | downstream | 57827 | 5953886 ~ 5958813 (+) | False | LOC110505637 |
| TU123491 | other | downstream | 57886 | 5953945 ~ 5958769 (+) | False | LOC110505637 |
| TU123495 | other | downstream | 57886 | 5953945 ~ 5958813 (+) | False | LOC110505637 |
