Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU295517 |
| length | 308 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 2 |
| gene id | col6a3 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 42291728 ~ 42329627 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU295475 | lncRNA | downstream | 61 | 42290259 ~ 42297785 (-) | False | G259579 |
| TU295457 | lncRNA | downstream | 5746 | 42291363 ~ 42292100 (-) | False | G259576 |
| TU295482 | lncRNA | downstream | 15328 | 42279545 ~ 42282518 (-) | True | LOC110519979 |
| TU295515 | lncRNA | downstream | 27722 | 42269230 ~ 42270124 (-) | True | G259614 |
| TU295501 | lncRNA | downstream | 64165 | 42233442 ~ 42233681 (-) | True | G259600 |
| TU295587 | lncRNA | upstream | 118514 | 42433201 ~ 42433418 (-) | True | G259685 |
| TU295594 | lncRNA | upstream | 124593 | 42439280 ~ 42439506 (-) | True | G259691 |
| TU295603 | lncRNA | upstream | 132600 | 42447287 ~ 42447514 (-) | True | G259700 |
| TU295683 | lncRNA | upstream | 271597 | 42586284 ~ 42590360 (-) | False | G259779 |
| TU295684 | lncRNA | upstream | 271597 | 42586284 ~ 42590360 (-) | True | G259779 |
| XM_036974106.1 | mRNA | downstream | 6241 | 42243576 ~ 42291605 (-) | False | LOC110519979 |
| XM_036974107.1 | mRNA | downstream | 6241 | 42243576 ~ 42291605 (-) | False | LOC110519979 |
| XM_036974108.1 | mRNA | downstream | 6241 | 42243576 ~ 42291605 (-) | False | LOC110519979 |
| XM_036974109.1 | mRNA | downstream | 6241 | 42243576 ~ 42291605 (-) | False | LOC110519979 |
| XM_036974110.1 | mRNA | downstream | 6241 | 42243576 ~ 42291605 (-) | False | LOC110519979 |
| XM_036964861.1 | mRNA | upstream | 14952 | 42329639 ~ 42334795 (-) | True | LOC110519978 |
| XM_036974111.1 | mRNA | upstream | 20220 | 42334907 ~ 42339654 (-) | False | LOC118936375 |
| XM_036974112.1 | mRNA | upstream | 22793 | 42337480 ~ 42339654 (-) | True | LOC118936375 |
| XM_021596918.2 | mRNA | upstream | 25223 | 42339910 ~ 42364268 (-) | True | LOC110519982 |
| XR_005039884.1 | mRNA | upstream | 140437 | 42455124 ~ 42457706 (-) | True | LOC110520683 |
| TU295474 | other | downstream | 2066 | 42292227 ~ 42295780 (-) | True | G259579 |
| TU295466 | other | downstream | 4677 | 42285630 ~ 42293169 (-) | False | G259576 |
| TU295453 | other | downstream | 7810 | 42288992 ~ 42290036 (-) | False | G259576 |
| TU295117 | other | downstream | 530258 | 41763817 ~ 41767588 (-) | True | G259259 |
| TU292362 | other | downstream | 1962406 | 40335210 ~ 40335440 (-) | True | G256632 |
| TU295450 | other | upstream | 8052 | 42322739 ~ 42325778 (-) | True | G259576 |
| TU297567 | other | upstream | 1674837 | 43989524 ~ 44031505 (-) | True | G261580 |
| TU299080 | other | upstream | 2695485 | 45010172 ~ 45012249 (-) | True | G262993 |
| TU299078 | other | upstream | 2784653 | 45099340 ~ 45104263 (-) | True | LOC110520012 |
| TU299385 | other | upstream | 3221645 | 45536332 ~ 45537542 (-) | True | G263274 |
