RNA id: TU323689



Basic Information


Item Value
RNA id TU323689
length 241
lncRNA type intronic
GC content 0.49
exon number 2
gene id G285445
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63955410 ~ 63955880 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggagcttagagtagaggagagaagaggagcttagagtagaggagagtagtgtagaggagaggagcttagagtagagtagaggagaggagcttagagtagaggagagaagaggagcttagagtagaggagagtagtgtagaggagaggagcttagagtagtgtagaggagaggagcttagagtcgtgtagaggagaggagcttagagtagaggagaggagcttagagttgtgtagaggagag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU323687 lncRNA downstream 1767 63951972 ~ 63953643 (-) True G285444
TU323688 lncRNA downstream 3245 63951457 ~ 63952165 (-) False G285444
TU323638 lncRNA downstream 86785 63867183 ~ 63868625 (-) True LOC110520378
TU323553 lncRNA downstream 294988 63648216 ~ 63660422 (-) True G285338
TU323484 lncRNA downstream 433393 63521727 ~ 63522017 (-) True G285277
TU323711 lncRNA upstream 36234 63992114 ~ 63992941 (-) False G285466
TU323710 lncRNA upstream 36718 63992598 ~ 63992941 (-) True G285466
TU323828 lncRNA upstream 219007 64174887 ~ 64175108 (-) True G285582
TU323870 lncRNA upstream 255206 64211086 ~ 64211389 (-) True G285624
TU323875 lncRNA upstream 258150 64214030 ~ 64214339 (-) True G285629
XM_036964596.1 mRNA downstream 51192 63901468 ~ 63904218 (-) False LOC110505395
XM_036964597.1 mRNA downstream 51192 63901468 ~ 63904218 (-) True LOC110505395
XM_036964580.1 mRNA downstream 51196 63901468 ~ 63904214 (-) False LOC110505395
XM_036964588.1 mRNA downstream 51197 63901468 ~ 63904213 (-) False LOC110505395
XM_036974916.1 mRNA upstream 529909 64485789 ~ 64641565 (-) False LOC110520379
XM_036974917.1 mRNA upstream 529909 64485789 ~ 64641565 (-) False LOC110520379
XM_021597673.2 mRNA upstream 896623 64852503 ~ 64855851 (-) True LOC110520388
XM_021597667.2 mRNA upstream 906146 64862026 ~ 64883035 (-) False LOC110520386
XM_021597666.2 mRNA upstream 906146 64862026 ~ 64890987 (-) False LOC110520386
TU322065 other downstream 1240233 62714575 ~ 62715177 (-) True G284018
TU315276 other downstream 6366227 57584386 ~ 57589183 (-) True G277749
TU315188 other downstream 6551835 57402984 ~ 57403575 (-) True G277673
TU315090 other downstream 6657648 57270782 ~ 57297762 (-) True si:dkey-91i10.3
TU312500 other downstream 8543923 55410143 ~ 55411487 (-) True G275250
TU324819 other upstream 1013669 64969549 ~ 64970755 (-) True G286522
TU324898 other upstream 1058379 65014259 ~ 65029736 (-) True G286580
TU324968 other upstream 1098820 65054700 ~ 65055211 (-) False G286638
TU324969 other upstream 1098820 65054700 ~ 65075985 (-) True G286638
TU325334 other upstream 1279300 65235180 ~ 65235908 (-) True G286953

Expression Profile