RNA id: TU329515



Basic Information


Item Value
RNA id TU329515
length 202
RNA type TUCP
GC content 0.55
exon number 2
gene id G290598
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68710367 ~ 68717385 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


aggatgtggagggaggatgtggataagaggatgtggagaggaggatgttgatggagaatgtggtgaggaggatgtggagggaggatgtggagaggaggatgtggtgaggaggatgtggagggaggatgtgaagaggagaatgtggagggaggatgtggagaggaggatgtggagaggaggatgtggtgaggaggatgtggag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU329434 lncRNA downstream 137058 68573110 ~ 68573309 (-) True G290539
TU329429 lncRNA downstream 154265 68555217 ~ 68556102 (-) True G290534
TU329421 lncRNA downstream 170570 68539416 ~ 68539797 (-) True G290526
TU329415 lncRNA downstream 182179 68527933 ~ 68528188 (-) True G290520
TU329414 lncRNA downstream 182858 68527281 ~ 68527509 (-) True G290519
TU329516 lncRNA upstream 5514 68722899 ~ 68727546 (-) True G290599
TU329541 lncRNA upstream 38025 68755410 ~ 68755852 (-) True G290623
TU329591 lncRNA upstream 97101 68814486 ~ 68814889 (-) True G290672
TU329592 lncRNA upstream 97627 68815012 ~ 68815236 (-) True G290673
TU329593 lncRNA upstream 97945 68815330 ~ 68815638 (-) True G290674
XR_002472988.2 mRNA downstream 123625 68584472 ~ 68586742 (-) True LOC110520471
XM_021597813.2 mRNA downstream 249788 68455461 ~ 68460579 (-) False LOC110520470
XM_021597811.2 mRNA downstream 417617 68278572 ~ 68292750 (-) True LOC110520467
XM_021597810.2 mRNA downstream 417618 68278572 ~ 68292749 (-) False LOC110520467
XM_021597808.2 mRNA downstream 457126 68227272 ~ 68253241 (-) True LOC110520466
XM_021597817.2 mRNA upstream 543118 69260503 ~ 69277276 (-) False LOC110520474
XM_036975027.1 mRNA upstream 663082 69380467 ~ 69469698 (-) True LOC110520476
XM_021597820.2 mRNA upstream 878452 69595837 ~ 69614655 (-) True LOC110520477
XM_021597827.2 mRNA upstream 923881 69641266 ~ 69644739 (-) False LOC110520480
XM_021597828.2 mRNA upstream 932152 69649537 ~ 69675010 (-) False ankrd10b
TU329467 other downstream 62747 68626332 ~ 68647620 (-) True G290567
TU329440 other downstream 129660 68579103 ~ 68580707 (-) True G290542
TU328904 other downstream 501972 68206590 ~ 68208395 (-) True si:ch211-214p13.7
TU328453 other downstream 824135 67883752 ~ 67886232 (-) True G289653
TU328494 other downstream 1076874 67626832 ~ 67633493 (-) True G289678
TU329520 other upstream 4423 68721808 ~ 68724914 (-) True G290602
TU329646 other upstream 129226 68846611 ~ 68850854 (-) True G290713
TU330123 other upstream 538620 69256005 ~ 69256544 (-) True G291138
TU330998 other upstream 1262961 69980346 ~ 69996605 (-) True G291901
TU331092 other upstream 1390155 70107540 ~ 70107950 (-) True G291977

Expression Profile