Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU332429 |
| length | 400 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 2 |
| gene id | G293128 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 71230804 ~ 71231379 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU332428 | lncRNA | downstream | 143 | 71230136 ~ 71230661 (-) | True | G293127 |
| TU332363 | lncRNA | downstream | 41435 | 71189033 ~ 71189369 (-) | True | G293064 |
| TU332341 | lncRNA | downstream | 55805 | 71170686 ~ 71174999 (-) | True | G293043 |
| TU332345 | lncRNA | downstream | 58385 | 71168257 ~ 71172419 (-) | True | G293046 |
| TU332339 | lncRNA | downstream | 58688 | 71162738 ~ 71172116 (-) | True | G293042 |
| TU332823 | lncRNA | upstream | 49204 | 71280583 ~ 71280916 (-) | True | G293486 |
| TU332830 | lncRNA | upstream | 69144 | 71300523 ~ 71301326 (-) | True | G293493 |
| TU332832 | lncRNA | upstream | 71695 | 71303074 ~ 71303688 (-) | True | G293495 |
| TU332839 | lncRNA | upstream | 89116 | 71320495 ~ 71320723 (-) | True | G293502 |
| TU332849 | lncRNA | upstream | 117454 | 71348833 ~ 71349318 (-) | True | G293511 |
| XM_036975071.1 | mRNA | downstream | 221085 | 70950681 ~ 71009719 (-) | True | cmss1 |
| XM_021597894.2 | mRNA | downstream | 221101 | 70950681 ~ 71009703 (-) | False | cmss1 |
| XM_036975070.1 | mRNA | downstream | 280205 | 70945034 ~ 70950599 (-) | True | tmem30c |
| XR_005051368.1 | mRNA | downstream | 323230 | 70896509 ~ 70907574 (-) | True | LOC118964322 |
| XM_021597890.2 | mRNA | downstream | 393313 | 70810604 ~ 70837491 (-) | True | LOC110520512 |
| XR_005051369.1 | mRNA | upstream | 441080 | 71672459 ~ 71676171 (-) | True | LOC118964323 |
| XM_036975076.1 | mRNA | upstream | 477103 | 71708482 ~ 71716359 (-) | False | LOC110520517 |
| XM_036965166.1 | mRNA | upstream | 522900 | 71754279 ~ 71764744 (-) | True | LOC110504652 |
| XM_036975077.1 | mRNA | upstream | 542651 | 71774030 ~ 71784997 (-) | False | rnaseh2b |
| XM_021597898.2 | mRNA | upstream | 542651 | 71774030 ~ 71785012 (-) | False | rnaseh2b |
| TU332200 | other | downstream | 190652 | 71027619 ~ 71040152 (-) | True | G292919 |
| TU332000 | other | downstream | 510213 | 70720036 ~ 70720591 (-) | True | G292753 |
| TU331092 | other | downstream | 1122854 | 70107540 ~ 70107950 (-) | True | G291977 |
| TU330998 | other | downstream | 1234199 | 69980346 ~ 69996605 (-) | True | G291901 |
| TU330123 | other | downstream | 1974260 | 69256005 ~ 69256544 (-) | True | G291138 |
| TU333405 | other | upstream | 671935 | 71903314 ~ 71903908 (-) | True | G293984 |
| TU333434 | other | upstream | 941670 | 72173049 ~ 72206798 (-) | True | LOC110504660 |
| TU333986 | other | upstream | 1339870 | 72571249 ~ 72575432 (-) | True | G294451 |
| TU334284 | other | upstream | 1544028 | 72775407 ~ 72776607 (-) | True | G294697 |
| TU334351 | other | upstream | 1644960 | 72876339 ~ 72880854 (-) | True | LOC110520539 |
