Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021600897.2 |
| length | 600 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 5 |
| gene id | LOC110522472 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 29952461 ~ 29957558 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02983 | RP-S30e, RPS30; small subunit ribosomal protein S30e |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU385112 | lncRNA | upstream | 12345 | 29939828 ~ 29940116 (+) | True | G340247 |
| TU385110 | lncRNA | upstream | 18587 | 29933621 ~ 29933874 (+) | True | G340245 |
| TU385109 | lncRNA | upstream | 19066 | 29933158 ~ 29933395 (+) | True | G340244 |
| TU385108 | lncRNA | upstream | 19766 | 29932476 ~ 29932695 (+) | True | G340243 |
| TU385107 | lncRNA | upstream | 20158 | 29931825 ~ 29932303 (+) | True | G340242 |
| TU385123 | lncRNA | downstream | 14604 | 29972162 ~ 29972386 (+) | True | G340258 |
| TU385124 | lncRNA | downstream | 15789 | 29973347 ~ 29974350 (+) | True | G340259 |
| TU385125 | lncRNA | downstream | 17584 | 29975142 ~ 29975459 (+) | True | G340260 |
| TU385128 | lncRNA | downstream | 20517 | 29978075 ~ 29978330 (+) | True | G340263 |
| TU385133 | lncRNA | downstream | 30837 | 29988395 ~ 29989043 (+) | True | G340267 |
| XM_036976080.1 | mRNA | upstream | 334 | 29942176 ~ 29952127 (+) | False | LOC110522470 |
| XM_021600894.2 | mRNA | upstream | 334 | 29942177 ~ 29952127 (+) | True | LOC110522470 |
| XM_036976075.1 | mRNA | upstream | 109551 | 29838369 ~ 29842910 (+) | False | LOC110522467 |
| XM_021600887.2 | mRNA | upstream | 109551 | 29839866 ~ 29842910 (+) | True | LOC110522467 |
| XM_021600884.2 | mRNA | upstream | 154321 | 29787568 ~ 29798140 (+) | True | LOC110522463 |
| XR_002473324.2 | mRNA | downstream | 838661 | 30796219 ~ 30797684 (+) | False | LOC110522479 |
| XR_002473325.2 | mRNA | downstream | 838661 | 30796219 ~ 30797687 (+) | True | LOC110522479 |
| XM_021600906.2 | mRNA | downstream | 858858 | 30816416 ~ 30823059 (+) | False | LOC110522477 |
| XM_021600904.2 | mRNA | downstream | 860244 | 30817802 ~ 30823059 (+) | False | LOC110522477 |
| XM_021600907.2 | mRNA | downstream | 860244 | 30817802 ~ 30823059 (+) | True | LOC110522477 |
| TU384729 | other | upstream | 615522 | 29335369 ~ 29336939 (+) | True | G339928 |
| TU384628 | other | upstream | 785465 | 29166518 ~ 29166996 (+) | True | G339830 |
| TU384441 | other | upstream | 1036922 | 28914599 ~ 28915539 (+) | True | G339693 |
| TU384407 | other | upstream | 1093306 | 28858716 ~ 28859155 (+) | True | G339660 |
| TU381324 | other | upstream | 2350905 | 27590852 ~ 27601556 (+) | True | LOC118964415 |
| TU387608 | other | downstream | 1424268 | 31381826 ~ 31382749 (+) | True | G342538 |
| TU387623 | other | downstream | 1460397 | 31417955 ~ 31419256 (+) | False | LOC110522493 |
| TU387645 | other | downstream | 1493575 | 31451133 ~ 31451476 (+) | True | G342571 |
| TU387844 | other | downstream | 1828307 | 31785865 ~ 31786206 (+) | True | G342707 |
| TU389208 | other | downstream | 2737428 | 32694986 ~ 32704371 (+) | True | G343958 |
