Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU432352 |
| length | 938 |
| lncRNA type | sense_over |
| GC content | 0.45 |
| exon number | 1 |
| gene id | LOC118964576 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 23737834 ~ 23747312 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU432277 | lncRNA | upstream | 119618 | 23617626 ~ 23618216 (+) | True | G380279 |
| TU432275 | lncRNA | upstream | 121581 | 23615857 ~ 23616253 (+) | True | G380277 |
| TU432256 | lncRNA | upstream | 133102 | 23604518 ~ 23604732 (+) | True | G380258 |
| TU431268 | lncRNA | upstream | 151746 | 23566477 ~ 23586088 (+) | True | G379395 |
| TU431264 | lncRNA | upstream | 170281 | 23560022 ~ 23567553 (+) | True | G379392 |
| TU432351 | lncRNA | downstream | 279 | 23739050 ~ 23739427 (+) | False | LOC118964576 |
| TU432347 | lncRNA | downstream | 3054 | 23741825 ~ 23747278 (+) | True | LOC118964576 |
| TU432366 | lncRNA | downstream | 14450 | 23753221 ~ 23753477 (+) | True | G380357 |
| TU432372 | lncRNA | downstream | 23250 | 23762021 ~ 23762408 (+) | True | G380363 |
| TU432374 | lncRNA | downstream | 24532 | 23763303 ~ 23763523 (+) | True | G380365 |
| XM_021602162.2 | mRNA | upstream | 2366 | 23713080 ~ 23735468 (+) | False | LOC110523463 |
| XM_021602163.2 | mRNA | upstream | 2366 | 23724027 ~ 23735468 (+) | True | LOC110523463 |
| NM_001165176.2 | mRNA | upstream | 25957 | 23709843 ~ 23711877 (+) | True | vatg1 |
| XM_036977086.1 | mRNA | upstream | 59796 | 23623921 ~ 23678038 (+) | False | LOC110522832 |
| XM_036977085.1 | mRNA | upstream | 59796 | 23623923 ~ 23678038 (+) | False | LOC110522832 |
| XM_021602173.2 | mRNA | downstream | 99731 | 23838502 ~ 23842045 (+) | False | LOC110523468 |
| XM_021602178.2 | mRNA | downstream | 109447 | 23848218 ~ 23853553 (+) | False | stard4 |
| XM_021602175.2 | mRNA | downstream | 109465 | 23848236 ~ 23853553 (+) | False | stard4 |
| XM_021602174.2 | mRNA | downstream | 109467 | 23848238 ~ 23853553 (+) | False | stard4 |
| XM_021602177.2 | mRNA | downstream | 109467 | 23848238 ~ 23853553 (+) | True | stard4 |
| TU432291 | other | upstream | 100743 | 23623964 ~ 23637091 (+) | False | LOC110522832 |
| TU432292 | other | upstream | 100743 | 23634021 ~ 23637091 (+) | True | LOC110522832 |
| TU430848 | other | upstream | 730547 | 22942292 ~ 23007287 (+) | True | lhfpl2a |
| TU430672 | other | upstream | 1108165 | 22602110 ~ 22629669 (+) | True | G378868 |
| TU430626 | other | upstream | 1231564 | 22503752 ~ 22506270 (+) | True | G378832 |
| TU432349 | other | downstream | 1663 | 23740434 ~ 23741459 (+) | True | G380340 |
| TU432379 | other | downstream | 99753 | 23838524 ~ 23843711 (+) | False | LOC110523468 |
| TU432380 | other | downstream | 99753 | 23838524 ~ 23842716 (+) | False | LOC110523468 |
| TU432381 | other | downstream | 99753 | 23838524 ~ 23844345 (+) | False | LOC110523468 |
| TU432383 | other | downstream | 99753 | 23838524 ~ 23843846 (+) | True | LOC110523468 |
