Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU438960 |
| length | 1253 |
| lncRNA type | sense_over |
| GC content | 0.40 |
| exon number | 4 |
| gene id | spag8 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 28926263 ~ 28931410 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU438898 | lncRNA | upstream | 74665 | 28852880 ~ 28853151 (+) | True | G386445 |
| TU438485 | lncRNA | upstream | 157249 | 28756510 ~ 28770567 (+) | True | G386065 |
| TU438477 | lncRNA | upstream | 208794 | 28718802 ~ 28719022 (+) | True | G386057 |
| TU438463 | lncRNA | upstream | 222304 | 28705178 ~ 28705512 (+) | True | G386044 |
| TU438443 | lncRNA | upstream | 242802 | 28684742 ~ 28685014 (+) | True | G386024 |
| TU438991 | lncRNA | downstream | 30886 | 28961817 ~ 28965648 (+) | True | G386537 |
| TU439028 | lncRNA | downstream | 63214 | 28994145 ~ 28995123 (+) | True | G386568 |
| TU439069 | lncRNA | downstream | 139881 | 29070812 ~ 29073163 (+) | True | G386606 |
| TU439295 | lncRNA | downstream | 243417 | 29174348 ~ 29174799 (+) | False | LOC110523576 |
| TU439294 | lncRNA | downstream | 256690 | 29187621 ~ 29187912 (+) | True | LOC110523576 |
| XM_021602358.2 | mRNA | upstream | 47673 | 28876573 ~ 28880143 (+) | True | LOC110523559 |
| XM_021602357.2 | mRNA | upstream | 90627 | 28829715 ~ 28837189 (+) | True | zfand5b |
| XM_021602355.2 | mRNA | upstream | 98388 | 28805226 ~ 28829428 (+) | True | smc5 |
| XM_021602354.2 | mRNA | upstream | 123105 | 28796448 ~ 28804711 (+) | True | LOC110523556 |
| XM_021602346.2 | mRNA | upstream | 147085 | 28752511 ~ 28780731 (+) | False | LOC110523554 |
| XM_021602365.2 | mRNA | downstream | 73836 | 29004767 ~ 29009110 (+) | True | ssna1 |
| XM_021602368.2 | mRNA | downstream | 114172 | 29045103 ~ 29055942 (+) | False | alad |
| XM_021602367.2 | mRNA | downstream | 114336 | 29045267 ~ 29055942 (+) | True | alad |
| LOC110522906 | mRNA | downstream | 130344 | 29061275 ~ 29067123 (+) | True | LOC110522906 |
| XM_036977216.1 | mRNA | downstream | 158594 | 29089525 ~ 29097342 (+) | False | coq4 |
| TU438217 | other | upstream | 510261 | 28416605 ~ 28417555 (+) | True | G385805 |
| TU437511 | other | upstream | 1023085 | 27904467 ~ 27904731 (+) | True | G385171 |
| TU437387 | other | upstream | 1220738 | 27706714 ~ 27707078 (+) | True | G385053 |
| TU437362 | other | upstream | 1244423 | 27675352 ~ 27683393 (+) | True | LOC110522888 |
| TU436048 | other | upstream | 2264203 | 26661838 ~ 26663613 (+) | True | G383794 |
| TU439971 | other | downstream | 810869 | 29741800 ~ 29746194 (+) | True | tbx5a |
| TU440079 | other | downstream | 966055 | 29896986 ~ 29898134 (+) | True | G387516 |
| TU440680 | other | downstream | 1356020 | 30286951 ~ 30287824 (+) | True | G388019 |
| TU442960 | other | downstream | 3029424 | 31960355 ~ 31960745 (+) | True | G390184 |
| TU443183 | other | downstream | 3289250 | 32220181 ~ 32220533 (+) | True | G390393 |
