Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU438991 |
| length | 392 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G386537 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 28961817 ~ 28965648 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU438960 | lncRNA | upstream | 30886 | 28927816 ~ 28930931 (+) | True | spag8 |
| TU438898 | lncRNA | upstream | 108666 | 28852880 ~ 28853151 (+) | True | G386445 |
| TU438485 | lncRNA | upstream | 191250 | 28756510 ~ 28770567 (+) | True | G386065 |
| TU438477 | lncRNA | upstream | 242795 | 28718802 ~ 28719022 (+) | True | G386057 |
| TU438463 | lncRNA | upstream | 256305 | 28705178 ~ 28705512 (+) | True | G386044 |
| TU439028 | lncRNA | downstream | 28497 | 28994145 ~ 28995123 (+) | True | G386568 |
| TU439069 | lncRNA | downstream | 105164 | 29070812 ~ 29073163 (+) | True | G386606 |
| TU439295 | lncRNA | downstream | 208700 | 29174348 ~ 29174799 (+) | False | LOC110523576 |
| TU439294 | lncRNA | downstream | 221973 | 29187621 ~ 29187912 (+) | True | LOC110523576 |
| TU439304 | lncRNA | downstream | 231239 | 29196887 ~ 29197098 (+) | True | G386814 |
| XM_021602360.2 | mRNA | upstream | 30407 | 28926263 ~ 28931410 (+) | False | spag8 |
| XM_021602358.2 | mRNA | upstream | 81674 | 28876573 ~ 28880143 (+) | True | LOC110523559 |
| XM_021602357.2 | mRNA | upstream | 124628 | 28829715 ~ 28837189 (+) | True | zfand5b |
| XM_021602355.2 | mRNA | upstream | 132389 | 28805226 ~ 28829428 (+) | True | smc5 |
| XM_021602354.2 | mRNA | upstream | 157106 | 28796448 ~ 28804711 (+) | True | LOC110523556 |
| XM_021602365.2 | mRNA | downstream | 39119 | 29004767 ~ 29009110 (+) | True | ssna1 |
| XM_021602368.2 | mRNA | downstream | 79455 | 29045103 ~ 29055942 (+) | False | alad |
| XM_021602367.2 | mRNA | downstream | 79619 | 29045267 ~ 29055942 (+) | True | alad |
| LOC110522906 | mRNA | downstream | 95627 | 29061275 ~ 29067123 (+) | True | LOC110522906 |
| XM_036977216.1 | mRNA | downstream | 123877 | 29089525 ~ 29097342 (+) | False | coq4 |
| TU438959 | other | upstream | 30886 | 28926277 ~ 28930931 (+) | False | spag8 |
| TU438217 | other | upstream | 544262 | 28416605 ~ 28417555 (+) | True | G385805 |
| TU437511 | other | upstream | 1057086 | 27904467 ~ 27904731 (+) | True | G385171 |
| TU437387 | other | upstream | 1254739 | 27706714 ~ 27707078 (+) | True | G385053 |
| TU437362 | other | upstream | 1278424 | 27675352 ~ 27683393 (+) | True | LOC110522888 |
| TU439971 | other | downstream | 776152 | 29741800 ~ 29746194 (+) | True | tbx5a |
| TU440079 | other | downstream | 931338 | 29896986 ~ 29898134 (+) | True | G387516 |
| TU440680 | other | downstream | 1321303 | 30286951 ~ 30287824 (+) | True | G388019 |
| TU442960 | other | downstream | 2994707 | 31960355 ~ 31960745 (+) | True | G390184 |
| TU443183 | other | downstream | 3254533 | 32220181 ~ 32220533 (+) | True | G390393 |
