Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU443148 |
| length | 212 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 1 |
| gene id | G390361 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 32176306 ~ 32176517 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU443142 | lncRNA | upstream | 17180 | 32153642 ~ 32159126 (+) | False | LOC110523608 |
| TU443140 | lncRNA | upstream | 17180 | 32158710 ~ 32159126 (+) | True | LOC110523608 |
| TU443063 | lncRNA | upstream | 84817 | 32086350 ~ 32091489 (+) | True | G390283 |
| TU443071 | lncRNA | upstream | 133937 | 32042108 ~ 32042369 (+) | True | G390291 |
| TU443069 | lncRNA | upstream | 137946 | 32037966 ~ 32038360 (+) | True | G390289 |
| TU443156 | lncRNA | downstream | 14801 | 32191318 ~ 32191719 (+) | True | G390369 |
| TU443159 | lncRNA | downstream | 17683 | 32194200 ~ 32194428 (+) | True | G390372 |
| TU443161 | lncRNA | downstream | 20114 | 32196631 ~ 32197569 (+) | True | G390374 |
| TU443167 | lncRNA | downstream | 26092 | 32202609 ~ 32203613 (+) | True | G390380 |
| TU443168 | lncRNA | downstream | 27308 | 32203825 ~ 32204377 (+) | True | G390381 |
| XR_002473470.2 | mRNA | upstream | 15889 | 32152908 ~ 32160417 (+) | False | LOC110523608 |
| XM_036977274.1 | mRNA | upstream | 1203963 | 30966139 ~ 30972343 (+) | False | LOC110522913 |
| XM_036977271.1 | mRNA | upstream | 1320708 | 30741854 ~ 30855598 (+) | False | LOC110522910 |
| XM_036977272.1 | mRNA | upstream | 1320708 | 30741854 ~ 30855598 (+) | False | LOC110522910 |
| XM_021602449.2 | mRNA | upstream | 1464646 | 30674938 ~ 30711660 (+) | False | LOC110523597 |
| XM_021602468.2 | mRNA | downstream | 81411 | 32257928 ~ 32270782 (+) | False | lhx3 |
| XM_021602467.2 | mRNA | downstream | 84131 | 32260648 ~ 32270782 (+) | False | lhx3 |
| XM_021602466.2 | mRNA | downstream | 84133 | 32260650 ~ 32270782 (+) | True | lhx3 |
| XM_036977283.1 | mRNA | downstream | 156985 | 32333502 ~ 32336445 (+) | False | LOC110523612 |
| XM_036977284.1 | mRNA | downstream | 164359 | 32340876 ~ 32390222 (+) | False | LOC110523614 |
| TU442960 | other | upstream | 215561 | 31960355 ~ 31960745 (+) | True | G390184 |
| TU440680 | other | upstream | 1888482 | 30286951 ~ 30287824 (+) | True | G388019 |
| TU440079 | other | upstream | 2278172 | 29896986 ~ 29898134 (+) | True | G387516 |
| TU439971 | other | upstream | 2430112 | 29741800 ~ 29746194 (+) | True | tbx5a |
| TU438959 | other | upstream | 3245375 | 28926277 ~ 28930931 (+) | False | spag8 |
| TU443183 | other | downstream | 43664 | 32220181 ~ 32220533 (+) | True | G390393 |
| TU444420 | other | downstream | 982309 | 33158826 ~ 33162980 (+) | True | G391513 |
| TU444741 | other | downstream | 1184440 | 33360957 ~ 33361341 (+) | True | G391805 |
| TU445804 | other | downstream | 1970957 | 34147474 ~ 34148701 (+) | False | G392776 |
| TU448046 | other | downstream | 3728595 | 35905112 ~ 35905781 (+) | True | G394882 |
