Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU443161 |
| length | 939 |
| lncRNA type | antisense_over |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G390374 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 32196631 ~ 32197569 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU443159 | lncRNA | upstream | 2203 | 32194200 ~ 32194428 (+) | True | G390372 |
| TU443156 | lncRNA | upstream | 4912 | 32191318 ~ 32191719 (+) | True | G390369 |
| TU443148 | lncRNA | upstream | 20114 | 32176306 ~ 32176517 (+) | True | G390361 |
| TU443142 | lncRNA | upstream | 37505 | 32153642 ~ 32159126 (+) | False | LOC110523608 |
| TU443140 | lncRNA | upstream | 37505 | 32158710 ~ 32159126 (+) | True | LOC110523608 |
| TU443167 | lncRNA | downstream | 5040 | 32202609 ~ 32203613 (+) | True | G390380 |
| TU443168 | lncRNA | downstream | 6256 | 32203825 ~ 32204377 (+) | True | G390381 |
| TU443169 | lncRNA | downstream | 8681 | 32206250 ~ 32206466 (+) | False | G390382 |
| TU443170 | lncRNA | downstream | 8681 | 32206250 ~ 32206667 (+) | True | G390382 |
| TU443177 | lncRNA | downstream | 15050 | 32212619 ~ 32212818 (+) | True | G390387 |
| XR_002473470.2 | mRNA | upstream | 36214 | 32152908 ~ 32160417 (+) | False | LOC110523608 |
| XM_036977274.1 | mRNA | upstream | 1224288 | 30966139 ~ 30972343 (+) | False | LOC110522913 |
| XM_036977271.1 | mRNA | upstream | 1341033 | 30741854 ~ 30855598 (+) | False | LOC110522910 |
| XM_036977272.1 | mRNA | upstream | 1341033 | 30741854 ~ 30855598 (+) | False | LOC110522910 |
| XM_036977270.1 | mRNA | upstream | 1484971 | 30675527 ~ 30711660 (+) | True | LOC110523597 |
| XM_021602468.2 | mRNA | downstream | 60359 | 32257928 ~ 32270782 (+) | False | lhx3 |
| XM_021602467.2 | mRNA | downstream | 63079 | 32260648 ~ 32270782 (+) | False | lhx3 |
| XM_021602466.2 | mRNA | downstream | 63081 | 32260650 ~ 32270782 (+) | True | lhx3 |
| XM_036977283.1 | mRNA | downstream | 135933 | 32333502 ~ 32336445 (+) | False | LOC110523612 |
| XM_036977284.1 | mRNA | downstream | 143307 | 32340876 ~ 32390222 (+) | False | LOC110523614 |
| TU442960 | other | upstream | 235886 | 31960355 ~ 31960745 (+) | True | G390184 |
| TU440680 | other | upstream | 1908807 | 30286951 ~ 30287824 (+) | True | G388019 |
| TU440079 | other | upstream | 2298497 | 29896986 ~ 29898134 (+) | True | G387516 |
| TU439971 | other | upstream | 2450437 | 29741800 ~ 29746194 (+) | True | tbx5a |
| TU438959 | other | upstream | 3265700 | 28926277 ~ 28930931 (+) | False | spag8 |
| TU443183 | other | downstream | 22612 | 32220181 ~ 32220533 (+) | True | G390393 |
| TU444420 | other | downstream | 961257 | 33158826 ~ 33162980 (+) | True | G391513 |
| TU444741 | other | downstream | 1163388 | 33360957 ~ 33361341 (+) | True | G391805 |
| TU445804 | other | downstream | 1949905 | 34147474 ~ 34148701 (+) | False | G392776 |
| TU448046 | other | downstream | 3707543 | 35905112 ~ 35905781 (+) | True | G394882 |
