RNA id: TCONS_00031698


Basic Information

Item Value
RNA id TCONS_00031698
length 809
RNA type processed_transcript
GC content 0.44
exon number 4
gene id XLOC_016028
representative False

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 59322130 ~ 59324688 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CAAGGATGCGCTAATGGACGACACGGATGACAAGGTAAGTgaCATCGTACATGCTCTGGGTGTCTTGAGGAGCTTGTCTTTGGATGATGCTGAGCAGGTCTTTCTTTCTGGTAACGGTTATCATTACAGTGAAGTAAAAGAATTTAACAGACAGATTGACAAACAACTGACAAAAGAAGAGAGACCATTTAATAGtccctttatttatcaggggttgccacagcagaatgaaccgccaacttatgcagcatatgttttacacagtggatacccttccagccgcaacccagtactgggaaacacccatttacactTATATacttgaacatggggagaacatgcaaactccacacagaaatgaccactggcccagccggggcttgaaccagcaaccttcttgctgtgaggcgacggtgctaaccactgtgctgccccatgTGCTCTATGCGGGTGAGTgggattgacaaaccacctggAGGACACACTCTTGCTGTCTTAATGCACaagacattttgttataaataatcatgtgcgtttcatgtttatttataaatctgCTAATTTATCtcatagcacttcatttttgtcttgatatttaatatcttttgtttaaatacactatgaacagcagctgcgctaattattttctttgttccctatttccacctggggatatttatctagaggcctctagagatcgtgacctgtgaagagatgatgccaccatagaggacttctagatgtatccataatcctggaccagaccGCATCACGAGCAGATGcagtggtggtcatggagaagtggagag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000140174

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00031694 lncRNA upstream 156441 59163700 ~ 59165800 (+) True XLOC_016024
TCONS_00031689 lncRNA upstream 308466 58995304 ~ 59013775 (+) True XLOC_016019
TCONS_00031688 lncRNA upstream 310753 58995304 ~ 59011488 (+) False XLOC_016019
TCONS_00033740 lncRNA upstream 453997 58865760 ~ 58868244 (+) True XLOC_016017
TCONS_00033337 lncRNA upstream 466351 58854496 ~ 58855890 (+) True XLOC_016016
TCONS_00033338 lncRNA downstream 88759 59413343 ~ 59435379 (+) True XLOC_016029
TCONS_00031692 mRNA upstream 258668 59041081 ~ 59063573 (+) False XLOC_016021
TCONS_00031693 mRNA upstream 264574 59046036 ~ 59057667 (+) True XLOC_016021
TCONS_00031691 mRNA upstream 289433 59015924 ~ 59032808 (+) True XLOC_016020
TCONS_00031690 mRNA upstream 289525 59015878 ~ 59032716 (+) False XLOC_016020
TCONS_00031687 mRNA upstream 439739 58877162 ~ 58882502 (+) True XLOC_016018
TCONS_00031702 mRNA downstream 202565 59527149 ~ 59565832 (+) True XLOC_016030
TCONS_00031695 other upstream 150303 59171268 ~ 59171938 (+) True XLOC_016025
TCONS_00031673 other upstream 2474382 56847743 ~ 56847859 (+) True XLOC_015992
TCONS_00031672 other upstream 2483442 56838681 ~ 56838799 (+) True XLOC_015991
TCONS_00031670 other upstream 2814852 56497894 ~ 56507389 (+) True XLOC_015987
TCONS_00031669 other upstream 2828580 56487668 ~ 56493661 (+) True XLOC_015986

Expression Profile

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