Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00031775 |
| length | 1375 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 5 |
| gene id | XLOC_016096 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 3603589 ~ 3616363 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0009056 | catabolic process | biological_process |
| GO:0005575 | cellular_component | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-060825-190 | Predicted to enable hydrolase activity, acting on ester bonds and zinc ion binding activity. Predicted to act upstream of or within catabolic process. Orthologous to human PTER (phosphotriesterase related). |
| ensembl_id | ENSDART00000144699 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00033762 | lncRNA | downstream | 83423 | 3519583 ~ 3520166 (-) | True | XLOC_016095 |
| TCONS_00031772 | lncRNA | downstream | 187382 | 3412076 ~ 3416207 (-) | True | XLOC_016092 |
| TCONS_00033761 | lncRNA | downstream | 200555 | 3394950 ~ 3403034 (-) | False | XLOC_016091 |
| TCONS_00033760 | lncRNA | downstream | 200569 | 3394950 ~ 3403020 (-) | False | XLOC_016091 |
| TCONS_00033759 | lncRNA | downstream | 1109289 | 2485435 ~ 2494300 (-) | True | XLOC_016082 |
| TCONS_00033348 | lncRNA | upstream | 497648 | 4114011 ~ 4118815 (-) | False | XLOC_016100 |
| TCONS_00031790 | lncRNA | upstream | 1162737 | 4779100 ~ 4797512 (-) | True | XLOC_016104 |
| TCONS_00031791 | lncRNA | upstream | 1196331 | 4812694 ~ 4814272 (-) | True | XLOC_016105 |
| TCONS_00033763 | lncRNA | upstream | 1833418 | 5449781 ~ 5453522 (-) | True | XLOC_016113 |
| TCONS_00031813 | lncRNA | upstream | 1847045 | 5463408 ~ 5466487 (-) | False | XLOC_016114 |
| TCONS_00031774 | mRNA | downstream | 165727 | 3435888 ~ 3437862 (-) | True | XLOC_016094 |
| TCONS_00031773 | mRNA | downstream | 183699 | 3416683 ~ 3419890 (-) | True | XLOC_016093 |
| TCONS_00031771 | mRNA | downstream | 199796 | 3401275 ~ 3403793 (-) | True | XLOC_016091 |
| TCONS_00031769 | mRNA | downstream | 200569 | 3387390 ~ 3403020 (-) | False | XLOC_016091 |
| TCONS_00031767 | mRNA | downstream | 444670 | 3106237 ~ 3158919 (-) | True | XLOC_016089 |
| TCONS_00031778 | mRNA | upstream | 13944 | 3630307 ~ 3678029 (-) | False | XLOC_016097 |
| TCONS_00031779 | mRNA | upstream | 14918 | 3631281 ~ 3654983 (-) | True | XLOC_016097 |
| TCONS_00031780 | mRNA | upstream | 403175 | 4019538 ~ 4032732 (-) | True | XLOC_016098 |
| TCONS_00031781 | mRNA | upstream | 428273 | 4044636 ~ 4070850 (-) | True | XLOC_016099 |
| TCONS_00031784 | mRNA | upstream | 874241 | 4490604 ~ 4496358 (-) | False | XLOC_016101 |
| TCONS_00031770 | other | downstream | 200555 | 3387572 ~ 3403034 (-) | False | XLOC_016091 |
| TCONS_00031768 | other | downstream | 477515 | 3125958 ~ 3126074 (-) | True | XLOC_016090 |
| TCONS_00031757 | other | downstream | 1302155 | 2301358 ~ 2301434 (-) | True | XLOC_016081 |
| TCONS_00031736 | other | downstream | 2647364 | 950248 ~ 956225 (-) | True | XLOC_016062 |
| TCONS_00031733 | other | downstream | 2705670 | 882336 ~ 897919 (-) | False | XLOC_016060 |
| TCONS_00031782 | other | upstream | 497755 | 4114118 ~ 4114216 (-) | False | XLOC_016100 |
| TCONS_00031783 | other | upstream | 499951 | 4116314 ~ 4116400 (-) | True | XLOC_016100 |
| TCONS_00031786 | other | upstream | 954650 | 4571013 ~ 4571103 (-) | True | XLOC_016102 |
| TCONS_00031796 | other | upstream | 1287197 | 4903560 ~ 5014629 (-) | False | XLOC_016107 |
| TCONS_00031798 | other | upstream | 1291433 | 4907796 ~ 4925127 (-) | False | XLOC_016107 |
