RNA id: TCONS_00031843


Basic Information

Item Value
RNA id TCONS_00031843
length 1581
RNA type mRNA
GC content 0.51
exon number 13
gene id XLOC_016131
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 6212205 ~ 6232517 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATTGGTTTGCCTTGCTTCGAAACCACGAGTGATTGGTagagttttaaaaacaattcCCCCTCAGCAACCTTTGAAGTGATTTCCTATTAAAAGACACGATTTTACCTCAGACATGTCTTTTCATCCGTGATCACGTCGCTGTTGCAGTTTTTTTGCTACATATTTGCTTTATTATATTGACTTTATTAACGGCTTCACAATGTTTTTCTACCCTACTGTGCTCAATCATCGGACTGGGCGATTTGCCACGATATGGTTGGCTGCCACTAAAGGACGAAAGATAAGTCGGAGAGATCTACTCAAAGTCAATGTCCATAACACCTGCAACGACATCATGGATTTCGTGTTGGTCAGAGTCCCGCCCCCTATGGCAGGATTGCCCCGCCCCCGTTTCTCCCTGTACCTCTCCTCTCAGCTGCAGTATGGAGTCGTGCTGGTCTTCCACAGACAGTGTGAATTTTTATTAGAGGACACTCAGGGGGCGATTGACAAGCTGCTTCGTCTAAACCGAAAGGCTAACATTGATTTGATGGAGGAGGATACCAGGCAAAGTCACATGATCCCAGATGCTGTTGCCTTATTTGATGAGACCGAGGGTGCGAGAGATCCGTTCTTTGGGATCATGGAGTACGGACTGCCAAGTCCAAGCAGCTTAATACAGAGACGAGAAAAGGTTTTACTAGAGTCTGTCCCGCCTGCTAGAGAGCCATCGCCACCTTCAGATGGCATCACGGCGAGCCAGGAGTCCATCACTCTGACAGAACCAGAGCCACTCATCATGCCTGAGCCACAGTTTGAAGGAGCAGATCTGCAGGAGGCCAACATGATCGAACTACTGCTGGAGCAGCCGGATCACTTTCTTGAGCGTGAAGATGAGAGACAGATGGAgatagacagagacagagagCGAACAGAGGAGGACAGAGAGCTGATGGTGTCTGAGGAAAGAGAGCTGGAGAGAGCGGCTCTGGAGAGAGAGACAGCCAGAGATCTGACAATATCAGCCTCTTTAGATCTTGCACAAATCACCGGTGCATCAAGTCAGGATGCTGTTCTGCTCCCCGAGGAGGATTTGGGGCTGCCCATGGAGATGCCTGTGATAGAAGAAAGAGAAAAGACCCCCGTATCCGCGCCTGTGCCCATACCATCACCTCCACCTGAAGAGGAAACAGGGGTTGAACCAAGGAGACAGCAGGCGGTGGGAGAAAGAAGCCCTCGTCTAGAGGCTGCTGTACTGAGCCCTGAACCAGAggtgaagaagaggaggaggaggcagCTGCTCTTCGTGGATGAATATACACAGATTTCTCAGGACGAAATGAGGGCCCGCATTAATGACGTGGAGACGATGACCAGGCCTCTGGAGTCCATCATCCCACCATCCATTCAGAAGAAGGATGCCAGAGAACTGCTCACAAACCCTTGCATGAGTCTTCCTCCTGAAATCCTGACTCTATGGAAACAGGCGGCCGTGGTGAAGCCTATCCCTCCATCCGAGCAGCGCTGGGAGATTCCTGAGGCTGAAGAAACACTAGAGCGAGAGGAGGAGGAATGCCCACAACCACCAGAGCCAGAAGTGGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000139842

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00031841 lncRNA downstream 99340 6107103 ~ 6112865 (-) True XLOC_016129
TCONS_00031834 lncRNA downstream 160458 6042039 ~ 6051747 (-) False XLOC_016126
TCONS_00031832 lncRNA downstream 177958 6029581 ~ 6034247 (-) True XLOC_016125
TCONS_00031828 lncRNA downstream 371711 5838896 ~ 5840494 (-) True XLOC_016123
TCONS_00033764 lncRNA downstream 483310 5726738 ~ 5728895 (-) True XLOC_016120
TCONS_00031852 lncRNA upstream 643234 6875751 ~ 6919316 (-) True XLOC_016139
TCONS_00031854 lncRNA upstream 847785 7080302 ~ 7080925 (-) True XLOC_016141
TCONS_00033765 lncRNA upstream 1169974 7402491 ~ 7422437 (-) False XLOC_016146
TCONS_00031863 lncRNA upstream 1255075 7487592 ~ 7494464 (-) True XLOC_016147
TCONS_00033766 lncRNA upstream 1314169 7546686 ~ 7548019 (-) True XLOC_016148
TCONS_00031842 mRNA downstream 30107 6150855 ~ 6182098 (-) True XLOC_016130
TCONS_00031839 mRNA downstream 96517 6106491 ~ 6115688 (-) False XLOC_016129
TCONS_00031840 mRNA downstream 96816 6106637 ~ 6115389 (-) False XLOC_016129
TCONS_00031838 mRNA downstream 99343 6104378 ~ 6112862 (-) False XLOC_016129
TCONS_00031837 mRNA downstream 108170 6092058 ~ 6104035 (-) True XLOC_016128
TCONS_00031844 mRNA upstream 28896 6261413 ~ 6262441 (-) True XLOC_016132
TCONS_00031845 mRNA upstream 33251 6265768 ~ 6292510 (-) True XLOC_016133
TCONS_00031846 mRNA upstream 89106 6321623 ~ 6373829 (-) True XLOC_016134
TCONS_00031847 mRNA upstream 243050 6475567 ~ 6482240 (-) True XLOC_016135
TCONS_00031848 mRNA upstream 278982 6511499 ~ 6519017 (-) False XLOC_016136
TCONS_00031833 other downstream 166810 6042039 ~ 6045395 (-) False XLOC_016126
TCONS_00031821 other downstream 651186 5554665 ~ 5561019 (-) False XLOC_016117
TCONS_00031800 other downstream 1168355 5040167 ~ 5043850 (-) False XLOC_016107
TCONS_00031799 other downstream 1227801 4942960 ~ 4984404 (-) False XLOC_016107
TCONS_00031798 other downstream 1287078 4907796 ~ 4925127 (-) False XLOC_016107
TCONS_00031851 other upstream 533776 6766293 ~ 6766407 (-) True XLOC_016138
TCONS_00031853 other upstream 676145 6908662 ~ 6908681 (-) True XLOC_016140
TCONS_00031892 other upstream 2401723 8634240 ~ 8635132 (-) True XLOC_016162
TCONS_00031895 other upstream 2448425 8680942 ~ 8684933 (-) True XLOC_016164
TCONS_00031900 other upstream 3174041 9406558 ~ 9406675 (-) True XLOC_016169

Expression Profile

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