RNA id: TCONS_00031848


Basic Information

Item Value
RNA id TCONS_00031848
length 1465
RNA type mRNA
GC content 0.39
exon number 4
gene id XLOC_016136
representative False

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 6511499 ~ 6519017 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTTGAAGCTGCACTTTGACGGGATGCATCAAAACATGCTGTTTTCCTACAAGCGTCACTATCTGTCTTGAATTCAACCGCAAAGTAAAGCGAAGTGACTTTTCCCTTGTCCATCAGCTCTGCGGTGAAGATGTTTTCTAGATGACCTGCGAGCCTGAAGAGATGACCCTGCCCAGAGCTTTGCATGCTGATTTCCATGTGTTCCATTCATGCCAGTAAACGTGTTCGGACCCTCCAGAGCCATAAAGAGCCACCGAGTGAAGCAGAGACTCATGCCGAAGACACTGCTGACAGAGATGGCCATAAAATTTTGTTGCTTTTCTCAGGAGCCTGTGGACGATGTGGACTCCTGGGGTGAGTCCATCGAGAAGCTGCTGTCCTGTAAAGCGGGACAGGCGGCTTTCCAGGACTTCCTGAAGTCGGAATACAGTGAGGAAAATATTCTGTTCTGGCTGGCATGTGAGGAATATAAAAAGGTGACGAATGAGCCGGAGATGATCAGCATGGCCAATCAGATCTACACTGAGTTTGTGCAGACGGAAGCACCCAGACAGGTTAACATCGATTCTGGGACTCGCACAAATATAACAAACAGCATCTCGGAGCCAACACGAAGCTCATTTGACACAGCACAGAAGATGATCTTCAGTCTAATGACCAGAGACTGCTATCCCAGGTTTCTGAAGTCCGACATCTACCAGTCCATCCTGCAAAAGCATGGAAAGAGATGACTTCATAACTAGTGGCGTATCCAGAGTACCAGTTGccataaacatgtttttttttaatcttgttttataTTTGGTAAGCATAATAAGTTTAGCTTTGgacttttaatattgttatttgtgAAGGAAAACACTCATTTCAGTGTCACTCTATAGGATGCAGTCTGATTTTCATGTTCAGTTGCCCATTGATTGATTTTTCCTCTTCACAGAAAATCAAACCAATTAATCACGTCTCATTTTAAACCATAACAGAAAATTGTATAATCACCATCATATCATCAAAAGAATGTTATAAATTATCCCGTGTGGGATTAAAGGATCTGTTATGGGCCTGCAATTGCCTGGTAATCAGCATACTGTTGAGAAATCCAGAAAAAGAGGATCTGAGCGCTCCTTTTTACACATGTACAGCCAATTCTCCTACAGTTAGCTTCTGTAGTAGTGCAacgtttttattagtttattaatcaggcatttaaaaaacataccattactattattgttgtttgttataattattatgatgtaaaatattttattatcactactactactttttttttttagggtttcTAATAATTGATGTCAGATCGTAAAGAGGGAAATTTGTACTATGAATTTAAGAGACTgtttaaaaaatgaccactatTATCTAGGCAGGAACATCCTggatttcttaaataaaaaaggagaaaaatctgtatataaaattgtaataaatgaacataaaatatg

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070705-145 Orthologous to human RGS1 (regulator of G protein signaling 1).

Ensembl:

ensembl_id ENSDART00000181716

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00031841 lncRNA downstream 398634 6107103 ~ 6112865 (-) True XLOC_016129
TCONS_00031834 lncRNA downstream 459752 6042039 ~ 6051747 (-) False XLOC_016126
TCONS_00031832 lncRNA downstream 477252 6029581 ~ 6034247 (-) True XLOC_016125
TCONS_00031828 lncRNA downstream 671005 5838896 ~ 5840494 (-) True XLOC_016123
TCONS_00033764 lncRNA downstream 782604 5726738 ~ 5728895 (-) True XLOC_016120
TCONS_00031852 lncRNA upstream 356734 6875751 ~ 6919316 (-) True XLOC_016139
TCONS_00031854 lncRNA upstream 561285 7080302 ~ 7080925 (-) True XLOC_016141
TCONS_00033765 lncRNA upstream 883474 7402491 ~ 7422437 (-) False XLOC_016146
TCONS_00031863 lncRNA upstream 968575 7487592 ~ 7494464 (-) True XLOC_016147
TCONS_00033766 lncRNA upstream 1027669 7546686 ~ 7548019 (-) True XLOC_016148
TCONS_00031847 mRNA downstream 29259 6475567 ~ 6482240 (-) True XLOC_016135
TCONS_00031846 mRNA downstream 137670 6321623 ~ 6373829 (-) True XLOC_016134
TCONS_00031845 mRNA downstream 218989 6265768 ~ 6292510 (-) True XLOC_016133
TCONS_00031844 mRNA downstream 249058 6261413 ~ 6262441 (-) True XLOC_016132
TCONS_00031843 mRNA downstream 278982 6212205 ~ 6232517 (-) True XLOC_016131
TCONS_00031850 mRNA upstream 16848 6535865 ~ 6548838 (-) True XLOC_016137
TCONS_00031855 mRNA upstream 601565 7120582 ~ 7131657 (-) False XLOC_016142
TCONS_00031856 mRNA upstream 604220 7123237 ~ 7131691 (-) True XLOC_016142
TCONS_00031857 mRNA upstream 630571 7149588 ~ 7189594 (-) False XLOC_016143
TCONS_00031858 mRNA upstream 636111 7155128 ~ 7185460 (-) True XLOC_016143
TCONS_00031833 other downstream 466104 6042039 ~ 6045395 (-) False XLOC_016126
TCONS_00031821 other downstream 950480 5554665 ~ 5561019 (-) False XLOC_016117
TCONS_00031800 other downstream 1467649 5040167 ~ 5043850 (-) False XLOC_016107
TCONS_00031799 other downstream 1527095 4942960 ~ 4984404 (-) False XLOC_016107
TCONS_00031798 other downstream 1586372 4907796 ~ 4925127 (-) False XLOC_016107
TCONS_00031851 other upstream 247276 6766293 ~ 6766407 (-) True XLOC_016138
TCONS_00031853 other upstream 389645 6908662 ~ 6908681 (-) True XLOC_016140
TCONS_00031892 other upstream 2115223 8634240 ~ 8635132 (-) True XLOC_016162
TCONS_00031895 other upstream 2161925 8680942 ~ 8684933 (-) True XLOC_016164
TCONS_00031900 other upstream 2887541 9406558 ~ 9406675 (-) True XLOC_016169

Expression Profile

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