Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00031913 |
| length | 882 |
| RNA type | mRNA |
| GC content | 0.34 |
| exon number | 3 |
| gene id | XLOC_016178 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 9746437 ~ 9748216 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016070 | RNA metabolic process | biological_process |
| GO:0016072 | rRNA metabolic process | biological_process |
| GO:0042273 | ribosomal large subunit biogenesis | biological_process |
| GO:0007399 | nervous system development | biological_process |
| GO:0044424 | obsolete intracellular part | cellular_component |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005730 | nucleolus | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-030131-7012 | No description available |
| ensembl_id | ENSDART00000134870 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00033775 | lncRNA | downstream | 327406 | 9330246 ~ 9419088 (-) | True | XLOC_016168 |
| TCONS_00033774 | lncRNA | downstream | 905610 | 8835922 ~ 8840884 (-) | True | XLOC_016165 |
| TCONS_00031883 | lncRNA | downstream | 1252355 | 8491405 ~ 8494139 (-) | True | XLOC_016159 |
| TCONS_00031881 | lncRNA | downstream | 1252482 | 8491082 ~ 8494012 (-) | False | XLOC_016159 |
| TCONS_00031921 | lncRNA | upstream | 56208 | 9804247 ~ 9804547 (-) | False | XLOC_016179 |
| TCONS_00031924 | lncRNA | upstream | 114794 | 9862833 ~ 9863388 (-) | True | XLOC_016181 |
| TCONS_00031942 | lncRNA | upstream | 680854 | 10428893 ~ 10432848 (-) | True | XLOC_016191 |
| TCONS_00031950 | lncRNA | upstream | 874196 | 10622235 ~ 10632377 (-) | True | XLOC_016194 |
| TCONS_00031964 | lncRNA | upstream | 1208182 | 10956221 ~ 11027191 (-) | True | XLOC_016200 |
| TCONS_00031910 | mRNA | downstream | 2413 | 9702053 ~ 9744081 (-) | True | XLOC_016177 |
| TCONS_00031908 | mRNA | downstream | 50211 | 9684305 ~ 9696283 (-) | True | XLOC_016175 |
| TCONS_00031907 | mRNA | downstream | 99637 | 9629558 ~ 9646857 (-) | True | XLOC_016174 |
| TCONS_00031906 | mRNA | downstream | 120946 | 9621289 ~ 9625548 (-) | True | XLOC_016173 |
| TCONS_00031905 | mRNA | downstream | 138615 | 9592319 ~ 9607879 (-) | True | XLOC_016172 |
| TCONS_00031916 | mRNA | upstream | 41772 | 9789811 ~ 9818711 (-) | False | XLOC_016179 |
| TCONS_00031918 | mRNA | upstream | 41794 | 9789833 ~ 9818673 (-) | False | XLOC_016179 |
| TCONS_00031917 | mRNA | upstream | 41794 | 9789833 ~ 9818673 (-) | False | XLOC_016179 |
| TCONS_00031919 | mRNA | upstream | 42433 | 9790472 ~ 9816532 (-) | False | XLOC_016179 |
| TCONS_00031920 | mRNA | upstream | 53565 | 9801604 ~ 9816492 (-) | False | XLOC_016179 |
| TCONS_00031909 | other | downstream | 58309 | 9688055 ~ 9688185 (-) | True | XLOC_016176 |
| TCONS_00031903 | other | downstream | 202333 | 9529488 ~ 9544161 (-) | False | XLOC_016171 |
| TCONS_00031900 | other | downstream | 339819 | 9406558 ~ 9406675 (-) | True | XLOC_016169 |
| TCONS_00031895 | other | downstream | 1061561 | 8680942 ~ 8684933 (-) | True | XLOC_016164 |
| TCONS_00031892 | other | downstream | 1111362 | 8634240 ~ 8635132 (-) | True | XLOC_016162 |
| TCONS_00031958 | other | upstream | 1157023 | 10905062 ~ 10905179 (-) | True | XLOC_016199 |
| TCONS_00031983 | other | upstream | 1908514 | 11656553 ~ 11662923 (-) | True | XLOC_016210 |
| TCONS_00031991 | other | upstream | 2476384 | 12224423 ~ 12224539 (-) | True | XLOC_016216 |
| TCONS_00031998 | other | upstream | 3504113 | 13252152 ~ 13254797 (-) | True | XLOC_016221 |
| TCONS_00032033 | other | upstream | 5246354 | 14994393 ~ 14994490 (-) | True | XLOC_016250 |
