RNA id: TCONS_00031939


Basic Information

Item Value
RNA id TCONS_00031939
length 579
RNA type mRNA
GC content 0.36
exon number 2
gene id XLOC_016189
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 10287133 ~ 10338813 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ACACTACAATAGTGATAAAGAATTCAATTAACTTCCATAAAATATTAAGATCATTTCCCGAGGAAATTATACAAACGGACATTTTGAGCTTGACGTGAAAGTAACTCGGGGGCGTGTTTTCCGTTTCTTCACTGATTTATCAGGAGATCACTCttgggagatttttttttaaagGTATATGGTTTTGAAAATGTCCTCTAAAATGTCGGGCTCAAACAATCTGGCTCATGCTAGGAGGATGGTACAGCAGCTGAGAGTCGAGGCCAGTATCGAGAGGATAAAGGTTAGTCCTCTACTTTATTTAAGCCACAAAGTCAGTTTTAAAAAGGTGGATCACTAGAGTAAgtctaaaaagaaaagaaatcttaACATGAAGATTTTGTTTTTTCAACTGCAGACTTCTACTTCCATGGATTTCTTTTGTTATACACTACCTGGGAAAAGTCTTATCGCCTATCCAACAGCATACagtataataacttgacttctagttgatcatttagtatcagaagtggcttatataaaaggcaaaggcctctagattacgcttattttaccaaaaaaaaatatgatcaggaC

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0005886 plasma membrane cellular_component
GO:0031680 G-protein beta/gamma-subunit complex cellular_component
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0031681 G-protein beta-subunit binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-2555 Predicted to enable G-protein beta-subunit binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in plasma membrane. Predicted to be part of heterotrimeric G-protein complex. Orthologous to human GNG12 (G protein subunit gamma 12).

Ensembl:

ensembl_id ENSDART00000150166

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00031924 lncRNA downstream 427649 9862833 ~ 9863388 (-) True XLOC_016181
TCONS_00031921 lncRNA downstream 486490 9804247 ~ 9804547 (-) False XLOC_016179
TCONS_00033778 lncRNA downstream 542821 9746437 ~ 9748216 (-) False XLOC_016178
TCONS_00031942 lncRNA upstream 90134 10428893 ~ 10432848 (-) True XLOC_016191
TCONS_00031950 lncRNA upstream 283476 10622235 ~ 10632377 (-) True XLOC_016194
TCONS_00031964 lncRNA upstream 617462 10956221 ~ 11027191 (-) True XLOC_016200
TCONS_00031975 lncRNA upstream 912338 11251097 ~ 11258378 (-) True XLOC_016203
TCONS_00031976 lncRNA upstream 991965 11330724 ~ 11331316 (-) True XLOC_016204
TCONS_00031936 mRNA downstream 98550 10185330 ~ 10192487 (-) False XLOC_016188
TCONS_00031937 mRNA downstream 98578 10185355 ~ 10192459 (-) True XLOC_016188
TCONS_00031935 mRNA downstream 102439 10183640 ~ 10188598 (-) False XLOC_016188
TCONS_00031934 mRNA downstream 192846 10087334 ~ 10098191 (-) True XLOC_016187
TCONS_00031933 mRNA downstream 228462 10056100 ~ 10062575 (-) True XLOC_016186
TCONS_00031940 mRNA upstream 3418 10342177 ~ 10386738 (-) True XLOC_016190
TCONS_00031941 mRNA upstream 57820 10396579 ~ 10450784 (-) False XLOC_016191
TCONS_00031944 mRNA upstream 129040 10467799 ~ 10563576 (-) False XLOC_016192
TCONS_00031943 mRNA upstream 129040 10467799 ~ 10563576 (-) False XLOC_016192
TCONS_00031945 mRNA upstream 129603 10468362 ~ 10564019 (-) True XLOC_016192
TCONS_00031915 other downstream 543606 9747302 ~ 9747431 (-) True XLOC_016178
TCONS_00031914 other downstream 544044 9746858 ~ 9746993 (-) False XLOC_016178
TCONS_00031909 other downstream 602852 9688055 ~ 9688185 (-) True XLOC_016176
TCONS_00031903 other downstream 746876 9529488 ~ 9544161 (-) False XLOC_016171
TCONS_00031900 other downstream 884362 9406558 ~ 9406675 (-) True XLOC_016169
TCONS_00031958 other upstream 566303 10905062 ~ 10905179 (-) True XLOC_016199
TCONS_00031983 other upstream 1317794 11656553 ~ 11662923 (-) True XLOC_016210
TCONS_00031991 other upstream 1885664 12224423 ~ 12224539 (-) True XLOC_016216
TCONS_00031998 other upstream 2913393 13252152 ~ 13254797 (-) True XLOC_016221
TCONS_00032033 other upstream 4655634 14994393 ~ 14994490 (-) True XLOC_016250

Expression Profile

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