Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021605691.2 |
| length | 642 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 4 |
| gene id | LOC110525517 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 22775999 ~ 22777465 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0019013 | viral nucleocapsid | cellular_component |
| id | description |
|---|---|
| K11088 | SNRPD3, SMD3; small nuclear ribonucleoprotein D3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU553140 | lncRNA | downstream | 34794 | 22740944 ~ 22741206 (-) | True | G486692 |
| TU553139 | lncRNA | downstream | 36306 | 22739495 ~ 22739694 (-) | True | G486691 |
| TU553133 | lncRNA | downstream | 44104 | 22730938 ~ 22731896 (-) | True | LOC110525508 |
| TU553125 | lncRNA | downstream | 63167 | 22712407 ~ 22712833 (-) | True | G486679 |
| TU553104 | lncRNA | downstream | 85843 | 22688955 ~ 22690157 (-) | True | G486658 |
| TU553177 | lncRNA | upstream | 2564 | 22780003 ~ 22781555 (-) | True | G486727 |
| TU553170 | lncRNA | upstream | 36814 | 22814253 ~ 22827725 (-) | True | G486721 |
| TU553279 | lncRNA | upstream | 209475 | 22986914 ~ 22988291 (-) | False | G486817 |
| TU553280 | lncRNA | upstream | 210234 | 22987673 ~ 22988702 (-) | True | G486817 |
| TU553277 | lncRNA | upstream | 228695 | 23006134 ~ 23010715 (-) | True | G486815 |
| XM_036980626.1 | mRNA | downstream | 16399 | 22758636 ~ 22759601 (-) | True | LOC110525513 |
| XM_021605680.2 | mRNA | downstream | 29391 | 22730507 ~ 22746609 (-) | False | LOC110525508 |
| XM_021605683.2 | mRNA | downstream | 45572 | 22727085 ~ 22730428 (-) | True | derl3 |
| XM_021605681.2 | mRNA | downstream | 83504 | 22682585 ~ 22692496 (-) | True | ptgesl |
| XR_002473764.2 | mRNA | downstream | 129912 | 22644152 ~ 22646088 (-) | False | LOC110525506 |
| XM_036979661.1 | mRNA | upstream | 14368 | 22791807 ~ 22793761 (-) | True | LOC110525531 |
| XM_036980627.1 | mRNA | upstream | 16595 | 22794034 ~ 22797348 (-) | True | LOC118964915 |
| XM_021605714.2 | mRNA | upstream | 65041 | 22842480 ~ 22848238 (-) | True | LOC110525528 |
| XM_036979650.1 | mRNA | upstream | 71091 | 22848530 ~ 22887954 (-) | False | LOC110525523 |
| XM_021605705.2 | mRNA | upstream | 90284 | 22867723 ~ 22890688 (-) | False | LOC110525523 |
| TU552199 | other | downstream | 494974 | 22280726 ~ 22281026 (-) | True | G485877 |
| TU552186 | other | downstream | 512647 | 22260634 ~ 22263353 (-) | True | G485864 |
| TU551550 | other | downstream | 941640 | 21833548 ~ 21834360 (-) | True | G485279 |
| TU551114 | other | downstream | 1341281 | 21431930 ~ 21434719 (-) | True | G484895 |
| TU551014 | other | downstream | 1477827 | 21296580 ~ 21298173 (-) | True | G484807 |
| TU553165 | other | upstream | 60214 | 22837653 ~ 22840566 (-) | True | G486716 |
| TU553428 | other | upstream | 473847 | 23251286 ~ 23253361 (-) | False | G486953 |
| TU553500 | other | upstream | 608095 | 23385534 ~ 23385907 (-) | True | G487022 |
| TU553494 | other | upstream | 612578 | 23390017 ~ 23392062 (-) | True | G487016 |
| TU554033 | other | upstream | 805597 | 23583036 ~ 23585554 (-) | False | LOC110525180 |
