RNA id: NM_001165146.2


Basic Information

Item Value
RNA id NM_001165146.2
length 1040
RNA type mRNA
GC content 0.49
exon number 8
gene id aakb1
representative True

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23614867 ~ 23617686 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

AGTCTGTCTTTGGGTTAGGTTACAATTTACCCGTTCAGGGGAAAATGGCGATAGGAAATACAATAGCGTAGATTCCCAGTATTATAATTTCCAGAAATTAAAGGAAGTGGTTGTTGCTGAGTCAGAATGGGAAACAACAGCAGCAGTGGTGAGCGGGCCAGTGCAGGTCAGGGTGAGAGGCCCTATCAGCGTGACGATGGACAAGGTGCCAAGGATGGAGCACGGCCCAAGATTATCATGGACAGCACAGATGATGCTGACCTGTTTAACACCAGAGAGGCTAAAAATGCTCCTCAGGAGATTCAGGAGTTTCTAGCCTGGCAGCGGGACCTTGAGAGTGACAGTAAATGTCCCAGTCAGGCCAAGCCCACTGTGTTCCGTTGGACAGGCGCTGGCAAAGAGATCTTTGTGTCTGGATCATTCAACAACTGGGCCACCAAGATTCCCCTCAACAAAAGCCAGAACAACTTTGCAGCGGTTGTGGACTTGCCTGAGGGAGAACACCAGTACAAATTCTGTGTAGATGGACAGTGGACCCTCGACCCGACAGGGGCTGTGTTGACGACCAAAACTGGCACGGTCAATAATGTCATTCAGGTGAAGAGGACTGACTTTGAGGTGTTTGATGCCCTCATGATTGATTCTCAGGAATGTGCAGACATGTCAGACCTCTCGAGTTCCCCTCCGGGACCCTACCAGCAGGACCCATACATAACCAAGACGAGCGACAAGCTCAAGAACCCCCCCATCCTGCCACCACACTTGCTGCAAGTCCTACTCAATAAGGACACTGGCGTGTCTTGTGACCCAGCCCTTCTTCCAGAGCCCAACCATGTGATGCTCAACCACCTCTATGCCCTCTCCATCAAGGATGGGGTGATGGTTCTTAGCGCAACTCACCGCTACAAAAAGAAGTATGTGACCACACTTCTGTACAAGCCGATCTAATCATGCCATCATGTGCGTCCTGCCTAGAAACGTTTCAAATCTATTCTTGTATAATTCTGTTTTTTATATCGATGATTAAACTTCTCTCTATC

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016301 kinase activity molecular_function

KEGG:

id description
K07199 PRKAB; 5'-AMP-activated protein kinase, regulatory beta subunit

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU554045 lncRNA downstream 19889 23594705 ~ 23594983 (-) True G487504
TU554044 lncRNA downstream 20718 23593953 ~ 23594154 (-) True G487503
TU554042 lncRNA downstream 23815 23590664 ~ 23591057 (-) True G487501
TU554037 lncRNA downstream 29318 23582929 ~ 23585554 (-) False LOC110525180
TU554028 lncRNA downstream 40237 23574387 ~ 23574635 (-) True G487495
TU554093 lncRNA upstream 56294 23673929 ~ 23674146 (-) True G487529
TU554106 lncRNA upstream 79583 23697218 ~ 23699515 (-) True G487538
TU554119 lncRNA upstream 85899 23703534 ~ 23704259 (-) True G487546
TU554118 lncRNA upstream 90383 23708018 ~ 23710130 (-) True LOC110525551
TU554113 lncRNA upstream 100751 23718386 ~ 23720835 (-) True LOC110525553
XM_021605743.2 mRNA downstream 7046 23606349 ~ 23607826 (-) True pla2g1b
XM_021605738.2 mRNA downstream 24520 23588230 ~ 23590352 (-) True LOC110525543
LOC110525180 mRNA downstream 26980 23582127 ~ 23587892 (-) False LOC110525180
XM_021605737.2 mRNA downstream 54070 23550291 ~ 23560802 (-) True LOC110525541
XM_036979673.1 mRNA downstream 64719 23510610 ~ 23550153 (-) True si:ch73-138n13.1
XM_036981822.1 mRNA upstream 5172 23622807 ~ 23643348 (-) True LOC118965070
XM_021605745.2 mRNA upstream 27360 23644995 ~ 23668368 (-) False LOC110525548
XM_021605746.2 mRNA upstream 27360 23644995 ~ 23668368 (-) False LOC110525548
XM_021605748.2 mRNA upstream 27360 23644995 ~ 23668368 (-) False LOC110525548
XM_021605749.2 mRNA upstream 27360 23644995 ~ 23668368 (-) False LOC110525548
TU554033 other downstream 29318 23583036 ~ 23585554 (-) False LOC110525180
TU554039 other downstream 29318 23583036 ~ 23585554 (-) True LOC110525180
TU553494 other downstream 222810 23390017 ~ 23392062 (-) True G487016
TU553500 other downstream 228965 23385534 ~ 23385907 (-) True G487022
TU553428 other downstream 361511 23251286 ~ 23253361 (-) False G486953
TU554111 other upstream 96240 23713875 ~ 23717783 (-) True LOC110525552
TU555138 other upstream 735898 24353533 ~ 24353823 (-) True G488386
TU555289 other upstream 1043262 24660897 ~ 24674901 (-) False LOC110525585
TU555288 other upstream 1088936 24706571 ~ 24709420 (-) False LOC110525585
TU555826 other upstream 1488570 25106205 ~ 25106570 (-) True G489038

Expression Profile