RNA id: TCONS_00032040


Basic Information

Item Value
RNA id TCONS_00032040
length 247
RNA type processed_transcript
GC content 0.43
exon number 2
gene id XLOC_016253
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 15102103 ~ 15107716 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ttcaGTTTATTCCGTGCTTCATCCAGAAAGACACTAAATTGTATACAAGACTTACATCTGTACTGCTGCTAACCACAAGGAGCCGTGATGGGGTCTTGGATGGTCAGCACAAGCTTCTTGTCTATGCTCACCGTCAGTGTGAACTGAGGTCTTCCTATTAAAGCTACAAGAAAAGAACAGTATTAATGGACTTAATACATGACTTGAGGTACTACTCTAGTATGCGAACTGAGAACGCGAGGTCGGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000135324

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033793 lncRNA downstream 137884 14962493 ~ 14964219 (-) True XLOC_016248
TCONS_00033358 lncRNA downstream 152477 14933798 ~ 14949626 (-) True XLOC_016246
TCONS_00032031 lncRNA downstream 162100 14938586 ~ 14940003 (-) True XLOC_016247
TCONS_00033792 lncRNA downstream 270980 14737043 ~ 14831123 (-) True XLOC_016243
TCONS_00033794 lncRNA upstream 529503 15637219 ~ 15650590 (-) True XLOC_016258
TCONS_00032050 lncRNA upstream 913941 16021657 ~ 16027339 (-) True XLOC_016259
TCONS_00033795 lncRNA upstream 1107379 16215095 ~ 16218098 (-) False XLOC_016260
TCONS_00033359 lncRNA upstream 1258358 16366074 ~ 16376418 (-) True XLOC_016261
TCONS_00032058 lncRNA upstream 1280253 16387969 ~ 16393313 (-) True XLOC_016262
TCONS_00032038 mRNA downstream 60257 15035090 ~ 15041846 (-) False XLOC_016252
TCONS_00032039 mRNA downstream 61758 15035093 ~ 15040345 (-) True XLOC_016252
TCONS_00032035 mRNA downstream 68940 14998612 ~ 15033163 (-) False XLOC_016251
TCONS_00032034 mRNA downstream 68967 14998612 ~ 15033136 (-) False XLOC_016251
TCONS_00032036 mRNA downstream 70245 14998613 ~ 15031858 (-) False XLOC_016251
TCONS_00032041 mRNA upstream 1812 15109528 ~ 15125512 (-) True XLOC_016254
TCONS_00032042 mRNA upstream 192372 15300088 ~ 15324837 (-) False XLOC_016255
TCONS_00032043 mRNA upstream 196486 15304202 ~ 15318786 (-) True XLOC_016255
TCONS_00032044 mRNA upstream 233973 15341689 ~ 15362923 (-) False XLOC_016256
TCONS_00032045 mRNA upstream 235414 15343130 ~ 15349382 (-) True XLOC_016256
TCONS_00032037 other downstream 68982 15028646 ~ 15033121 (-) True XLOC_016251
TCONS_00032033 other downstream 107613 14994393 ~ 14994490 (-) True XLOC_016250
TCONS_00031998 other downstream 1847306 13252152 ~ 13254797 (-) True XLOC_016221
TCONS_00031991 other downstream 2877564 12224423 ~ 12224539 (-) True XLOC_016216
TCONS_00031983 other downstream 3439180 11656553 ~ 11662923 (-) True XLOC_016210
TCONS_00032063 other upstream 1401108 16508824 ~ 16512422 (-) True XLOC_016264
TCONS_00032069 other upstream 1508224 16615940 ~ 16616055 (-) True XLOC_016267
TCONS_00032073 other upstream 1836556 16944272 ~ 16944391 (-) True XLOC_016269
TCONS_00032082 other upstream 2231702 17339418 ~ 17392808 (-) False XLOC_016272
TCONS_00032083 other upstream 2246115 17353831 ~ 17392719 (-) True XLOC_016272

Expression Profile

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