RNA id: TCONS_00032077


Basic Information

Item Value
RNA id TCONS_00032077
length 566
RNA type mRNA
GC content 0.54
exon number 4
gene id XLOC_016271
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 17200320 ~ 17235891 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTTTGTTCTCTGGCTTTTAGAAGAGGACATGCCCGTGAGAAAGTCAGTTGCTCGAAAAATATGTTGCGTTAAAGAAGCGCGTGTGGATTTTACCCGCGAAGACACGCTCATCTGCCTGCGAGAAGCGCGTGGCTGTACGGATTTGGCGCGCCTCAAGCTCTCCATCTCTGAACGCACGGTGGGAGTTTGGTGGTGGCCGAGTAGTCGGATCGGAGCAATGCCTTCCATGCCATCCGTCACCAGTGAGCCATGTCAAAGGAGACGCTGGCAGGTGCTTGTATGGGTTCTGATGTCTCTGCTGCCCCTAGTGGCAGGGGGCAGGTCGCGTTTTCGGGTAGAATCAGAAGCTGCGGTGGGATTTGGTGCTGCAGGAGTTGATGATCCACCCTTGGAGGCTTTTCCAGATGTTGAAGAAGAGCTCGAGGAGGGCAGTGACTCCCCGTGGCATGGTCTCTTTGAGCCATCTGTTCTTATTGAAGATGACCAGCAGCCAGCGCGATGGGAACGTTCTCCTCGCTCACCGGATACCTCTGACATACAGACCAAAGGTGCAcgcaagaaaaaga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000144251

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00032076 lncRNA downstream 85484 17113329 ~ 17114836 (-) True XLOC_016270
TCONS_00032072 lncRNA downstream 259187 16933799 ~ 16941133 (-) True XLOC_016268
TCONS_00032068 lncRNA downstream 645844 16548872 ~ 16554476 (-) True XLOC_016266
TCONS_00032065 lncRNA downstream 680940 16517034 ~ 16519380 (-) True XLOC_016265
TCONS_00032064 lncRNA downstream 681029 16512861 ~ 16519291 (-) False XLOC_016265
TCONS_00032093 lncRNA upstream 556277 17792168 ~ 17947144 (-) True XLOC_016274
TCONS_00032096 lncRNA upstream 1591390 18827281 ~ 18830794 (-) True XLOC_016275
TCONS_00033797 lncRNA upstream 1864531 19100422 ~ 19105442 (-) False XLOC_016276
TCONS_00033798 lncRNA upstream 1916481 19152372 ~ 19181553 (-) False XLOC_016278
TCONS_00033799 lncRNA upstream 1916481 19152372 ~ 19181569 (-) False XLOC_016278
TCONS_00032074 mRNA downstream 85064 17096161 ~ 17115256 (-) False XLOC_016270
TCONS_00032075 mRNA downstream 85468 17096850 ~ 17114852 (-) False XLOC_016270
TCONS_00032070 mRNA downstream 155361 16885285 ~ 17044959 (-) False XLOC_016268
TCONS_00032071 mRNA downstream 213426 16910557 ~ 16986894 (-) False XLOC_016268
TCONS_00032066 mRNA downstream 634630 16547706 ~ 16565690 (-) False XLOC_016266
TCONS_00032078 mRNA upstream 30868 17266759 ~ 17392895 (-) False XLOC_016272
TCONS_00032079 mRNA upstream 31769 17267660 ~ 17393216 (-) False XLOC_016272
TCONS_00032080 mRNA upstream 31769 17267660 ~ 17393971 (-) False XLOC_016272
TCONS_00032081 mRNA upstream 81872 17317763 ~ 17392799 (-) False XLOC_016272
TCONS_00032084 mRNA upstream 214337 17450228 ~ 17492080 (-) False XLOC_016273
TCONS_00032073 other downstream 255929 16944272 ~ 16944391 (-) True XLOC_016269
TCONS_00032069 other downstream 584265 16615940 ~ 16616055 (-) True XLOC_016267
TCONS_00032063 other downstream 687898 16508824 ~ 16512422 (-) True XLOC_016264
TCONS_00032040 other downstream 2092604 15102103 ~ 15107716 (-) True XLOC_016253
TCONS_00032037 other downstream 2167199 15028646 ~ 15033121 (-) True XLOC_016251
TCONS_00032082 other upstream 103527 17339418 ~ 17392808 (-) False XLOC_016272
TCONS_00032083 other upstream 117940 17353831 ~ 17392719 (-) True XLOC_016272
TCONS_00032102 other upstream 1981847 19217738 ~ 19222433 (-) False XLOC_016279
TCONS_00032107 other upstream 2126907 19362798 ~ 19363161 (-) True XLOC_016282
TCONS_00032108 other upstream 2270420 19506311 ~ 19513296 (-) False XLOC_016284

Expression Profile

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