Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU550560 |
| length | 1051 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G484421 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 21028662 ~ 21029712 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU550563 | lncRNA | downstream | 1240 | 21026800 ~ 21027422 (-) | True | G484424 |
| TU550562 | lncRNA | downstream | 3067 | 21024842 ~ 21025595 (-) | True | G484423 |
| TU550545 | lncRNA | downstream | 19580 | 21007016 ~ 21009082 (-) | False | G484409 |
| TU550549 | lncRNA | downstream | 23898 | 21004483 ~ 21004764 (-) | True | G484411 |
| TU550548 | lncRNA | downstream | 24287 | 21004045 ~ 21004375 (-) | True | G484410 |
| TU550561 | lncRNA | upstream | 234 | 21029946 ~ 21030666 (-) | True | G484422 |
| TU550630 | lncRNA | upstream | 85296 | 21115008 ~ 21115535 (-) | False | LOC110525458 |
| TU550632 | lncRNA | upstream | 85296 | 21115008 ~ 21115499 (-) | False | LOC110525458 |
| TU550631 | lncRNA | upstream | 85381 | 21115093 ~ 21115499 (-) | False | LOC110525458 |
| TU550628 | lncRNA | upstream | 85495 | 21115207 ~ 21116053 (-) | False | LOC110525458 |
| XM_021604973.2 | mRNA | downstream | 40794 | 20986307 ~ 20987868 (-) | True | LOC110525011 |
| XM_021605571.2 | mRNA | downstream | 88943 | 20926969 ~ 20939719 (-) | True | LOC110525450 |
| XM_021605575.2 | mRNA | downstream | 102604 | 20923163 ~ 20926058 (-) | True | lcn15 |
| XM_021605570.2 | mRNA | downstream | 106334 | 20878464 ~ 20922328 (-) | False | jak2b |
| XM_036979588.1 | mRNA | upstream | 2307 | 21032019 ~ 21037929 (-) | False | tor2a |
| XM_021605578.2 | mRNA | upstream | 2307 | 21032019 ~ 21037968 (-) | True | tor2a |
| XM_021605585.2 | mRNA | upstream | 85308 | 21115020 ~ 21121728 (-) | False | LOC110525458 |
| XM_021605586.2 | mRNA | upstream | 101419 | 21131131 ~ 21135682 (-) | False | zbtb26 |
| XM_021605587.2 | mRNA | upstream | 101419 | 21131131 ~ 21135690 (-) | False | zbtb26 |
| TU550546 | other | downstream | 19580 | 21007016 ~ 21009082 (-) | False | G484409 |
| TU550547 | other | downstream | 19580 | 21007016 ~ 21009082 (-) | True | G484409 |
| TU550351 | other | downstream | 419926 | 20588262 ~ 20608736 (-) | True | G484232 |
| TU550345 | other | downstream | 443015 | 20584221 ~ 20585647 (-) | False | LOC110525433 |
| TU550275 | other | downstream | 588978 | 20439307 ~ 20439684 (-) | True | G484175 |
| TU550627 | other | upstream | 90264 | 21119976 ~ 21121067 (-) | True | LOC110525458 |
| TU551014 | other | upstream | 266868 | 21296580 ~ 21298173 (-) | True | G484807 |
| TU551114 | other | upstream | 402218 | 21431930 ~ 21434719 (-) | True | G484895 |
| TU551550 | other | upstream | 803836 | 21833548 ~ 21834360 (-) | True | G485279 |
| TU552186 | other | upstream | 1230922 | 22260634 ~ 22263353 (-) | True | G485864 |
