Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU551578 |
| length | 277 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G485307 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 21808421 ~ 21808697 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU551558 | lncRNA | downstream | 30398 | 21776944 ~ 21778023 (-) | True | LOC110525119 |
| TU551154 | lncRNA | downstream | 261976 | 21518135 ~ 21546445 (-) | True | G484929 |
| TU551104 | lncRNA | downstream | 268002 | 21421212 ~ 21540419 (-) | True | G484888 |
| TU551127 | lncRNA | downstream | 354282 | 21451333 ~ 21454139 (-) | True | G484904 |
| TU551077 | lncRNA | downstream | 421244 | 21386796 ~ 21387177 (-) | True | G484863 |
| TU551542 | lncRNA | upstream | 18903 | 21827600 ~ 21828319 (-) | True | G485275 |
| TU551549 | lncRNA | upstream | 19980 | 21828677 ~ 21829570 (-) | False | G485278 |
| TU551548 | lncRNA | upstream | 20349 | 21829046 ~ 21829752 (-) | True | G485278 |
| TU551630 | lncRNA | upstream | 74709 | 21883406 ~ 21883617 (-) | True | G485351 |
| TU551637 | lncRNA | upstream | 86955 | 21895652 ~ 21895870 (-) | True | G485358 |
| LOC110525119 | mRNA | downstream | 29259 | 21775601 ~ 21779162 (-) | False | LOC110525119 |
| XM_036979607.1 | mRNA | downstream | 44298 | 21745476 ~ 21764123 (-) | False | LOC110525478 |
| XM_036979608.1 | mRNA | downstream | 44299 | 21751378 ~ 21764122 (-) | True | LOC110525478 |
| XM_021605609.2 | mRNA | downstream | 44306 | 21745476 ~ 21764115 (-) | False | LOC110525478 |
| XM_021605610.2 | mRNA | downstream | 44307 | 21745476 ~ 21764114 (-) | False | LOC110525478 |
| XM_021605618.2 | mRNA | upstream | 83373 | 21892070 ~ 21894808 (-) | True | tubb2b |
| XM_021605623.2 | mRNA | upstream | 407118 | 22215815 ~ 22231402 (-) | True | nr5a1a |
| XM_021605625.2 | mRNA | upstream | 455926 | 22264623 ~ 22378999 (-) | False | nr6a1a |
| XM_021605626.2 | mRNA | upstream | 630189 | 22438886 ~ 22441136 (-) | True | LOC110525492 |
| XM_021605627.2 | mRNA | upstream | 632547 | 22441244 ~ 22457748 (-) | False | LOC110525493 |
| TU551114 | other | downstream | 373702 | 21431930 ~ 21434719 (-) | True | G484895 |
| TU551014 | other | downstream | 510248 | 21296580 ~ 21298173 (-) | True | G484807 |
| TU550627 | other | downstream | 687354 | 21119976 ~ 21121067 (-) | True | LOC110525458 |
| TU550546 | other | downstream | 799339 | 21007016 ~ 21009082 (-) | False | G484409 |
| TU551550 | other | upstream | 24851 | 21833548 ~ 21834360 (-) | True | G485279 |
| TU552186 | other | upstream | 451937 | 22260634 ~ 22263353 (-) | True | G485864 |
| TU552199 | other | upstream | 472029 | 22280726 ~ 22281026 (-) | True | G485877 |
| TU553165 | other | upstream | 1028956 | 22837653 ~ 22840566 (-) | True | G486716 |
| TU553428 | other | upstream | 1442589 | 23251286 ~ 23253361 (-) | False | G486953 |
