Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU551650 |
| length | 220 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G485371 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 21915322 ~ 21915541 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU551638 | lncRNA | downstream | 19012 | 21896077 ~ 21896310 (-) | True | G485359 |
| TU551637 | lncRNA | downstream | 19452 | 21895652 ~ 21895870 (-) | True | G485358 |
| TU551630 | lncRNA | downstream | 31705 | 21883406 ~ 21883617 (-) | True | G485351 |
| TU551548 | lncRNA | downstream | 85570 | 21829046 ~ 21829752 (-) | True | G485278 |
| TU551549 | lncRNA | downstream | 85752 | 21828677 ~ 21829570 (-) | False | G485278 |
| TU551665 | lncRNA | upstream | 32554 | 21948095 ~ 21950163 (-) | True | G485385 |
| TU551676 | lncRNA | upstream | 50042 | 21965583 ~ 21967082 (-) | True | G485395 |
| TU551736 | lncRNA | upstream | 121069 | 22036610 ~ 22036846 (-) | True | G485452 |
| TU551737 | lncRNA | upstream | 121671 | 22037212 ~ 22037542 (-) | True | G485453 |
| TU551765 | lncRNA | upstream | 146433 | 22061974 ~ 22062201 (-) | True | G485481 |
| XM_021605618.2 | mRNA | downstream | 20514 | 21892070 ~ 21894808 (-) | True | tubb2b |
| LOC110525119 | mRNA | downstream | 136160 | 21775601 ~ 21779162 (-) | False | LOC110525119 |
| XM_036979607.1 | mRNA | downstream | 151199 | 21745476 ~ 21764123 (-) | False | LOC110525478 |
| XM_036979608.1 | mRNA | downstream | 151200 | 21751378 ~ 21764122 (-) | True | LOC110525478 |
| XM_021605609.2 | mRNA | downstream | 151207 | 21745476 ~ 21764115 (-) | False | LOC110525478 |
| XM_021605623.2 | mRNA | upstream | 300274 | 22215815 ~ 22231402 (-) | True | nr5a1a |
| XM_021605625.2 | mRNA | upstream | 349082 | 22264623 ~ 22378999 (-) | False | nr6a1a |
| XM_021605626.2 | mRNA | upstream | 523345 | 22438886 ~ 22441136 (-) | True | LOC110525492 |
| XM_021605627.2 | mRNA | upstream | 525703 | 22441244 ~ 22457748 (-) | False | LOC110525493 |
| XM_021605629.2 | mRNA | upstream | 525703 | 22441244 ~ 22457748 (-) | False | LOC110525493 |
| TU551550 | other | downstream | 80962 | 21833548 ~ 21834360 (-) | True | G485279 |
| TU551114 | other | downstream | 480603 | 21431930 ~ 21434719 (-) | True | G484895 |
| TU551014 | other | downstream | 617149 | 21296580 ~ 21298173 (-) | True | G484807 |
| TU550627 | other | downstream | 794255 | 21119976 ~ 21121067 (-) | True | LOC110525458 |
| TU550547 | other | downstream | 906240 | 21007016 ~ 21009082 (-) | True | G484409 |
| TU552186 | other | upstream | 345093 | 22260634 ~ 22263353 (-) | True | G485864 |
| TU552199 | other | upstream | 365185 | 22280726 ~ 22281026 (-) | True | G485877 |
| TU553165 | other | upstream | 922112 | 22837653 ~ 22840566 (-) | True | G486716 |
| TU553428 | other | upstream | 1335745 | 23251286 ~ 23253361 (-) | False | G486953 |
| TU553500 | other | upstream | 1469993 | 23385534 ~ 23385907 (-) | True | G487022 |
