Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU552226 |
| length | 379 |
| lncRNA type | intronic |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G485904 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 22324761 ~ 22325139 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU552205 | lncRNA | downstream | 34890 | 22289580 ~ 22289871 (-) | True | G485883 |
| TU552200 | lncRNA | downstream | 42867 | 22281670 ~ 22281894 (-) | True | G485878 |
| TU552197 | lncRNA | downstream | 46119 | 22278376 ~ 22278642 (-) | True | G485875 |
| TU552189 | lncRNA | downstream | 59533 | 22264726 ~ 22265228 (-) | True | nr6a1a |
| TU552190 | lncRNA | downstream | 61100 | 22263440 ~ 22263661 (-) | True | G485868 |
| TU552227 | lncRNA | upstream | 385 | 22325524 ~ 22325750 (-) | True | G485905 |
| TU552230 | lncRNA | upstream | 5649 | 22330788 ~ 22331063 (-) | True | G485908 |
| TU552235 | lncRNA | upstream | 8618 | 22333757 ~ 22334019 (-) | True | G485913 |
| TU552236 | lncRNA | upstream | 11898 | 22337037 ~ 22337350 (-) | True | G485914 |
| TU552238 | lncRNA | upstream | 15290 | 22340429 ~ 22340649 (-) | True | G485916 |
| XM_021605623.2 | mRNA | downstream | 93359 | 22215815 ~ 22231402 (-) | True | nr5a1a |
| XM_021605618.2 | mRNA | downstream | 429953 | 21892070 ~ 21894808 (-) | True | tubb2b |
| LOC110525119 | mRNA | downstream | 545599 | 21775601 ~ 21779162 (-) | False | LOC110525119 |
| XM_036979607.1 | mRNA | downstream | 560638 | 21745476 ~ 21764123 (-) | False | LOC110525478 |
| XM_021605626.2 | mRNA | upstream | 113747 | 22438886 ~ 22441136 (-) | True | LOC110525492 |
| XM_021605627.2 | mRNA | upstream | 116105 | 22441244 ~ 22457748 (-) | False | LOC110525493 |
| XM_021605629.2 | mRNA | upstream | 116105 | 22441244 ~ 22457748 (-) | False | LOC110525493 |
| XM_021605630.2 | mRNA | upstream | 116105 | 22441244 ~ 22457748 (-) | False | LOC110525493 |
| XR_005052036.1 | mRNA | upstream | 116105 | 22441244 ~ 22457748 (-) | True | LOC110525493 |
| TU552199 | other | downstream | 43735 | 22280726 ~ 22281026 (-) | True | G485877 |
| TU552186 | other | downstream | 61408 | 22260634 ~ 22263353 (-) | True | G485864 |
| TU551550 | other | downstream | 490401 | 21833548 ~ 21834360 (-) | True | G485279 |
| TU551114 | other | downstream | 890042 | 21431930 ~ 21434719 (-) | True | G484895 |
| TU551014 | other | downstream | 1026588 | 21296580 ~ 21298173 (-) | True | G484807 |
| TU553165 | other | upstream | 512514 | 22837653 ~ 22840566 (-) | True | G486716 |
| TU553428 | other | upstream | 926147 | 23251286 ~ 23253361 (-) | False | G486953 |
| TU553500 | other | upstream | 1060395 | 23385534 ~ 23385907 (-) | True | G487022 |
| TU553494 | other | upstream | 1064878 | 23390017 ~ 23392062 (-) | True | G487016 |
| TU554033 | other | upstream | 1257897 | 23583036 ~ 23585554 (-) | False | LOC110525180 |
