Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU554446 |
| length | 247 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G487820 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 24234802 ~ 24235048 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU554377 | lncRNA | downstream | 25521 | 24207065 ~ 24209281 (-) | True | G487754 |
| TU554433 | lncRNA | downstream | 29570 | 24204881 ~ 24205232 (-) | True | G487807 |
| TU554431 | lncRNA | downstream | 32551 | 24201922 ~ 24202251 (-) | True | G487805 |
| TU554427 | lncRNA | downstream | 36105 | 24198066 ~ 24198697 (-) | True | G487801 |
| TU554424 | lncRNA | downstream | 39727 | 24194762 ~ 24195075 (-) | True | G487798 |
| TU554447 | lncRNA | upstream | 155 | 24235203 ~ 24235484 (-) | True | G487821 |
| TU554452 | lncRNA | upstream | 6806 | 24241854 ~ 24242060 (-) | True | G487826 |
| TU555021 | lncRNA | upstream | 77243 | 24312291 ~ 24314486 (-) | True | G488329 |
| TU555088 | lncRNA | upstream | 82864 | 24317912 ~ 24321755 (-) | True | ncor2 |
| TU555206 | lncRNA | upstream | 273288 | 24508336 ~ 24508631 (-) | True | G488444 |
| XM_021605797.2 | mRNA | downstream | 10542 | 24211144 ~ 24224260 (-) | True | ccdc92 |
| XM_021605798.2 | mRNA | downstream | 10566 | 24211144 ~ 24224236 (-) | False | ccdc92 |
| XM_021605790.2 | mRNA | downstream | 50433 | 24129400 ~ 24184369 (-) | False | dtx1 |
| XM_021605792.2 | mRNA | downstream | 50433 | 24129400 ~ 24184369 (-) | False | dtx1 |
| XM_021605794.2 | mRNA | downstream | 50433 | 24129400 ~ 24184369 (-) | True | dtx1 |
| XM_036979698.1 | mRNA | upstream | 82864 | 24317912 ~ 24504123 (-) | False | ncor2 |
| XM_036981738.1 | mRNA | upstream | 322439 | 24557487 ~ 24566324 (-) | True | LOC118965019 |
| XR_005052405.1 | mRNA | upstream | 343657 | 24578705 ~ 24579373 (-) | True | LOC118965071 |
| XM_021605809.2 | mRNA | upstream | 362922 | 24597970 ~ 24634358 (-) | False | ep400 |
| XM_036979699.1 | mRNA | upstream | 362922 | 24597970 ~ 24634358 (-) | False | ep400 |
| TU554111 | other | downstream | 517019 | 23713875 ~ 23717783 (-) | True | LOC110525552 |
| TU554033 | other | downstream | 649248 | 23583036 ~ 23585554 (-) | False | LOC110525180 |
| TU554039 | other | downstream | 649248 | 23583036 ~ 23585554 (-) | True | LOC110525180 |
| TU553494 | other | downstream | 842740 | 23390017 ~ 23392062 (-) | True | G487016 |
| TU553500 | other | downstream | 848895 | 23385534 ~ 23385907 (-) | True | G487022 |
| TU555138 | other | upstream | 118485 | 24353533 ~ 24353823 (-) | True | G488386 |
| TU555289 | other | upstream | 425849 | 24660897 ~ 24674901 (-) | False | LOC110525585 |
| TU555288 | other | upstream | 471523 | 24706571 ~ 24709420 (-) | False | LOC110525585 |
| TU555826 | other | upstream | 871157 | 25106205 ~ 25106570 (-) | True | G489038 |
| TU556319 | other | upstream | 1261915 | 25496963 ~ 25497489 (-) | True | G489511 |
