Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU556126 |
| length | 517 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G489328 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 25435443 ~ 25435959 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU556108 | lncRNA | downstream | 830 | 25433514 ~ 25434613 (-) | True | G489311 |
| TU556114 | lncRNA | downstream | 15661 | 25419528 ~ 25419782 (-) | True | G489317 |
| TU556113 | lncRNA | downstream | 17226 | 25418011 ~ 25418217 (-) | True | G489316 |
| TU556112 | lncRNA | downstream | 18236 | 25416890 ~ 25417207 (-) | True | G489315 |
| TU556104 | lncRNA | downstream | 28776 | 25406046 ~ 25406667 (-) | True | G489307 |
| TU556127 | lncRNA | upstream | 1704 | 25437663 ~ 25437968 (-) | True | G489329 |
| TU556105 | lncRNA | upstream | 13111 | 25449070 ~ 25449302 (-) | True | LOC110525597 |
| TU556106 | lncRNA | upstream | 19138 | 25455097 ~ 25458118 (-) | True | G489309 |
| TU556130 | lncRNA | upstream | 24432 | 25460391 ~ 25460724 (-) | True | G489332 |
| TU556131 | lncRNA | upstream | 25417 | 25461376 ~ 25461681 (-) | True | G489333 |
| XM_036979719.1 | mRNA | downstream | 59961 | 25172861 ~ 25375482 (-) | False | LOC110525591 |
| XM_021605839.2 | mRNA | downstream | 59963 | 25172861 ~ 25375480 (-) | False | LOC110525591 |
| XM_021605837.2 | mRNA | downstream | 517591 | 24911627 ~ 24917852 (-) | True | LOC110525589 |
| XM_021605835.2 | mRNA | downstream | 550438 | 24873223 ~ 24885005 (-) | False | piwil1 |
| XR_002473781.2 | mRNA | upstream | 13060 | 25449019 ~ 25451212 (-) | False | LOC110525597 |
| XM_021605858.2 | mRNA | upstream | 207273 | 25643232 ~ 25660249 (-) | True | LOC110525601 |
| XM_021605860.2 | mRNA | upstream | 268215 | 25704174 ~ 25768791 (-) | False | lmx1bb |
| XM_021605859.2 | mRNA | upstream | 268215 | 25704174 ~ 25768792 (-) | False | lmx1bb |
| XM_036979725.1 | mRNA | upstream | 273293 | 25709252 ~ 25768796 (-) | True | lmx1bb |
| TU555826 | other | downstream | 328873 | 25106205 ~ 25106570 (-) | True | G489038 |
| TU555288 | other | downstream | 726023 | 24706571 ~ 24709420 (-) | False | LOC110525585 |
| TU555289 | other | downstream | 760542 | 24660897 ~ 24674901 (-) | False | LOC110525585 |
| TU555138 | other | downstream | 1081620 | 24353533 ~ 24353823 (-) | True | G488386 |
| TU554111 | other | downstream | 1717660 | 23713875 ~ 23717783 (-) | True | LOC110525552 |
| TU556319 | other | upstream | 61004 | 25496963 ~ 25497489 (-) | True | G489511 |
| TU557298 | other | upstream | 843748 | 26279707 ~ 26283169 (-) | True | LOC110525606 |
| TU557449 | other | upstream | 1019773 | 26455732 ~ 26457841 (-) | True | tmem230b |
| TU557799 | other | upstream | 1111263 | 26547222 ~ 26551627 (-) | True | LOC110525619 |
| TU558306 | other | upstream | 1388908 | 26824867 ~ 26867158 (-) | True | G491291 |
