Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU556130 |
| length | 334 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G489332 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 25460391 ~ 25460724 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU556106 | lncRNA | downstream | 2273 | 25455097 ~ 25458118 (-) | True | G489309 |
| TU556105 | lncRNA | downstream | 11089 | 25449070 ~ 25449302 (-) | True | LOC110525597 |
| TU556127 | lncRNA | downstream | 22423 | 25437663 ~ 25437968 (-) | True | G489329 |
| TU556126 | lncRNA | downstream | 24432 | 25435443 ~ 25435959 (-) | True | G489328 |
| TU556108 | lncRNA | downstream | 25778 | 25433514 ~ 25434613 (-) | True | G489311 |
| TU556131 | lncRNA | upstream | 652 | 25461376 ~ 25461681 (-) | True | G489333 |
| TU556138 | lncRNA | upstream | 5036 | 25465760 ~ 25466022 (-) | True | G489336 |
| TU556120 | lncRNA | upstream | 28438 | 25489162 ~ 25490155 (-) | True | G489322 |
| TU556326 | lncRNA | upstream | 47264 | 25507988 ~ 25508249 (-) | True | G489518 |
| TU556328 | lncRNA | upstream | 50445 | 25511169 ~ 25511388 (-) | True | G489520 |
| XR_002473781.2 | mRNA | downstream | 9179 | 25449019 ~ 25451212 (-) | False | LOC110525597 |
| XM_036979719.1 | mRNA | downstream | 84909 | 25172861 ~ 25375482 (-) | False | LOC110525591 |
| XM_021605839.2 | mRNA | downstream | 84911 | 25172861 ~ 25375480 (-) | False | LOC110525591 |
| XM_021605837.2 | mRNA | downstream | 542539 | 24911627 ~ 24917852 (-) | True | LOC110525589 |
| XM_021605836.2 | mRNA | downstream | 575386 | 24873223 ~ 24885005 (-) | True | piwil1 |
| XM_021605858.2 | mRNA | upstream | 182508 | 25643232 ~ 25660249 (-) | True | LOC110525601 |
| XM_021605860.2 | mRNA | upstream | 243450 | 25704174 ~ 25768791 (-) | False | lmx1bb |
| XM_021605859.2 | mRNA | upstream | 243450 | 25704174 ~ 25768792 (-) | False | lmx1bb |
| XM_036979725.1 | mRNA | upstream | 248528 | 25709252 ~ 25768796 (-) | True | lmx1bb |
| XM_021605870.2 | mRNA | upstream | 518230 | 25978954 ~ 26067630 (-) | False | pbx3b |
| TU555826 | other | downstream | 353821 | 25106205 ~ 25106570 (-) | True | G489038 |
| TU555288 | other | downstream | 750971 | 24706571 ~ 24709420 (-) | False | LOC110525585 |
| TU555289 | other | downstream | 785490 | 24660897 ~ 24674901 (-) | False | LOC110525585 |
| TU555138 | other | downstream | 1106568 | 24353533 ~ 24353823 (-) | True | G488386 |
| TU554111 | other | downstream | 1742608 | 23713875 ~ 23717783 (-) | True | LOC110525552 |
| TU556319 | other | upstream | 36239 | 25496963 ~ 25497489 (-) | True | G489511 |
| TU557298 | other | upstream | 818983 | 26279707 ~ 26283169 (-) | True | LOC110525606 |
| TU557449 | other | upstream | 995008 | 26455732 ~ 26457841 (-) | True | tmem230b |
| TU557799 | other | upstream | 1086498 | 26547222 ~ 26551627 (-) | True | LOC110525619 |
| TU558306 | other | upstream | 1364143 | 26824867 ~ 26867158 (-) | True | G491291 |
