Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU556443 |
| length | 1327 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G489622 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 25641539 ~ 25643175 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU556407 | lncRNA | downstream | 34060 | 25596797 ~ 25607479 (-) | True | G489590 |
| TU556335 | lncRNA | downstream | 121626 | 25519709 ~ 25519913 (-) | True | G489527 |
| TU556332 | lncRNA | downstream | 123883 | 25517411 ~ 25517656 (-) | True | G489524 |
| TU556328 | lncRNA | downstream | 130151 | 25511169 ~ 25511388 (-) | True | G489520 |
| TU556326 | lncRNA | downstream | 133290 | 25507988 ~ 25508249 (-) | True | G489518 |
| TU556451 | lncRNA | upstream | 19966 | 25663141 ~ 25663812 (-) | True | G489630 |
| TU556467 | lncRNA | upstream | 41277 | 25684452 ~ 25684684 (-) | True | G489646 |
| TU556527 | lncRNA | upstream | 127962 | 25771137 ~ 25771355 (-) | True | G489706 |
| TU556542 | lncRNA | upstream | 142424 | 25785599 ~ 25785942 (-) | True | G489721 |
| TU556554 | lncRNA | upstream | 152649 | 25795824 ~ 25796123 (-) | True | G489731 |
| XR_002473781.2 | mRNA | downstream | 190327 | 25449019 ~ 25451212 (-) | False | LOC110525597 |
| XM_036979719.1 | mRNA | downstream | 266057 | 25172861 ~ 25375482 (-) | False | LOC110525591 |
| XM_021605839.2 | mRNA | downstream | 266059 | 25172861 ~ 25375480 (-) | False | LOC110525591 |
| XM_021605837.2 | mRNA | downstream | 723687 | 24911627 ~ 24917852 (-) | True | LOC110525589 |
| XM_021605836.2 | mRNA | downstream | 756534 | 24873223 ~ 24885005 (-) | True | piwil1 |
| XM_021605858.2 | mRNA | upstream | 57 | 25643232 ~ 25660249 (-) | True | LOC110525601 |
| XM_021605860.2 | mRNA | upstream | 60999 | 25704174 ~ 25768791 (-) | False | lmx1bb |
| XM_021605859.2 | mRNA | upstream | 60999 | 25704174 ~ 25768792 (-) | False | lmx1bb |
| XM_036979725.1 | mRNA | upstream | 66077 | 25709252 ~ 25768796 (-) | True | lmx1bb |
| XM_021605870.2 | mRNA | upstream | 335779 | 25978954 ~ 26067630 (-) | False | pbx3b |
| TU556319 | other | downstream | 144050 | 25496963 ~ 25497489 (-) | True | G489511 |
| TU555826 | other | downstream | 534969 | 25106205 ~ 25106570 (-) | True | G489038 |
| TU555288 | other | downstream | 932119 | 24706571 ~ 24709420 (-) | False | LOC110525585 |
| TU555289 | other | downstream | 966638 | 24660897 ~ 24674901 (-) | False | LOC110525585 |
| TU555138 | other | downstream | 1287716 | 24353533 ~ 24353823 (-) | True | G488386 |
| TU557298 | other | upstream | 636532 | 26279707 ~ 26283169 (-) | True | LOC110525606 |
| TU557449 | other | upstream | 812557 | 26455732 ~ 26457841 (-) | True | tmem230b |
| TU557799 | other | upstream | 904047 | 26547222 ~ 26551627 (-) | True | LOC110525619 |
| TU558306 | other | upstream | 1181692 | 26824867 ~ 26867158 (-) | True | G491291 |
| TU558571 | other | upstream | 1573432 | 27216607 ~ 27244193 (-) | True | G491539 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| bowfin (Amia calva) | TU76670 | True | 1245 | lncRNA | 0.36 | 2 | CM030127.1 | 11713501 ~ 11723414 (-) |
