Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU560057 |
| length | 386 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G492902 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 28401868 ~ 28402253 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU560122 | lncRNA | downstream | 21956 | 28379660 ~ 28379912 (-) | True | G492963 |
| TU560119 | lncRNA | downstream | 24637 | 28376967 ~ 28377231 (-) | True | G492960 |
| TU560055 | lncRNA | downstream | 120949 | 28276875 ~ 28280919 (-) | True | LOC110525665 |
| TU560076 | lncRNA | downstream | 144234 | 28256722 ~ 28257634 (-) | True | LOC110525663 |
| TU559721 | lncRNA | downstream | 216060 | 28185570 ~ 28185808 (-) | True | G492596 |
| TU560138 | lncRNA | upstream | 3791 | 28406044 ~ 28406324 (-) | True | G492979 |
| TU560141 | lncRNA | upstream | 6812 | 28409065 ~ 28409279 (-) | True | G492982 |
| TU560145 | lncRNA | upstream | 23511 | 28425764 ~ 28425969 (-) | True | G492986 |
| TU560041 | lncRNA | upstream | 27825 | 28430078 ~ 28435167 (-) | True | dbnlb |
| TU560153 | lncRNA | upstream | 49237 | 28451490 ~ 28451787 (-) | True | G492994 |
| XM_021606003.2 | mRNA | downstream | 31852 | 28356038 ~ 28370016 (-) | True | LOC110525668 |
| XM_021606002.2 | mRNA | downstream | 49119 | 28313313 ~ 28352749 (-) | True | LOC110525666 |
| XM_036979776.1 | mRNA | downstream | 49122 | 28313313 ~ 28352746 (-) | False | LOC110525666 |
| XM_021605998.2 | mRNA | downstream | 92141 | 28286508 ~ 28309727 (-) | False | LOC110525665 |
| XM_021606009.2 | mRNA | upstream | 831 | 28403084 ~ 28414473 (-) | False | LOC110525671 |
| XM_021606008.2 | mRNA | upstream | 9488 | 28411741 ~ 28414473 (-) | True | LOC110525671 |
| XM_021606012.2 | mRNA | upstream | 12484 | 28414737 ~ 28421614 (-) | False | arid5a |
| XM_021606011.2 | mRNA | upstream | 12484 | 28414737 ~ 28425225 (-) | True | arid5a |
| XM_021606015.2 | mRNA | upstream | 30106 | 28432359 ~ 28448181 (-) | False | dbnlb |
| TU559292 | other | downstream | 566566 | 27827231 ~ 27835302 (-) | False | LOC110525655 |
| TU559251 | other | downstream | 664890 | 27734996 ~ 27736978 (-) | True | LOC110525653 |
| TU558571 | other | downstream | 1157675 | 27216607 ~ 27244193 (-) | True | G491539 |
| TU558306 | other | downstream | 1534710 | 26824867 ~ 26867158 (-) | True | G491291 |
| TU557799 | other | downstream | 1850241 | 26547222 ~ 26551627 (-) | True | LOC110525619 |
| TU561692 | other | upstream | 1008962 | 29411215 ~ 29415314 (-) | True | G494389 |
| TU561696 | other | upstream | 1076402 | 29478655 ~ 29483346 (-) | True | LOC110525681 |
| TU561743 | other | upstream | 1100000 | 29502253 ~ 29503391 (-) | True | LOC110525684 |
| TU561865 | other | upstream | 1273070 | 29675323 ~ 29675573 (-) | True | G494542 |
| TU562998 | other | upstream | 2124433 | 30526686 ~ 30527546 (-) | True | LOC110525714 |
