Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU793920 |
| length | 1521 |
| RNA type | TUCP |
| GC content | 0.45 |
| exon number | 4 |
| gene id | LOC110529804 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 32214451 ~ 32217572 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU793897 | lncRNA | downstream | 54438 | 32159223 ~ 32160048 (-) | True | G697561 |
| TU793896 | lncRNA | downstream | 55831 | 32158354 ~ 32158655 (-) | True | G697560 |
| TU793895 | lncRNA | downstream | 56267 | 32157997 ~ 32158219 (-) | True | G697559 |
| TU793889 | lncRNA | downstream | 64669 | 32149612 ~ 32149817 (-) | True | G697555 |
| TU793875 | lncRNA | downstream | 88575 | 32125696 ~ 32125911 (-) | True | G697544 |
| TU793944 | lncRNA | upstream | 7058 | 32224607 ~ 32224813 (-) | True | G697604 |
| TU793972 | lncRNA | upstream | 37972 | 32255521 ~ 32268603 (-) | True | G697632 |
| TU793982 | lncRNA | upstream | 67341 | 32284890 ~ 32285129 (-) | True | G697642 |
| TU793983 | lncRNA | upstream | 85321 | 32302870 ~ 32303081 (-) | True | G697643 |
| TU793984 | lncRNA | upstream | 85608 | 32303157 ~ 32305119 (-) | True | G697644 |
| XM_021612332.2 | mRNA | downstream | 79292 | 32132683 ~ 32135194 (-) | True | LOC110529796 |
| XM_021612327.2 | mRNA | downstream | 510961 | 31657632 ~ 31703525 (-) | False | LOC110529793 |
| XM_021612326.2 | mRNA | downstream | 534684 | 31657632 ~ 31679802 (-) | False | LOC110529793 |
| XM_021612325.2 | mRNA | downstream | 608295 | 31602683 ~ 31606191 (-) | True | LOC110529792 |
| XM_021612323.2 | mRNA | downstream | 710496 | 31486817 ~ 31503990 (-) | True | LOC110529791 |
| NM_001160613.2 | mRNA | upstream | 51546 | 32269095 ~ 32278234 (-) | True | bpnt1 |
| XM_021612356.2 | mRNA | upstream | 68509 | 32286058 ~ 32287169 (-) | True | LOC110529808 |
| XM_036985295.1 | mRNA | upstream | 71515 | 32289064 ~ 32300567 (-) | False | LOC110529806 |
| XM_021612352.2 | mRNA | upstream | 71515 | 32289064 ~ 32300571 (-) | False | LOC110529806 |
| XM_021612345.2 | mRNA | upstream | 71515 | 32289064 ~ 32300579 (-) | False | LOC110529806 |
| TU792983 | other | downstream | 534751 | 31657726 ~ 31679735 (-) | True | LOC110529793 |
| TU792778 | other | downstream | 736459 | 31477354 ~ 31478027 (-) | True | G696499 |
| TU792310 | other | downstream | 1359079 | 30855107 ~ 30855407 (-) | True | G696073 |
| TU792305 | other | downstream | 1367277 | 30846902 ~ 30847209 (-) | True | G696068 |
| TU790963 | other | downstream | 2152318 | 30038588 ~ 30062168 (-) | True | G694858 |
| TU794118 | other | upstream | 281250 | 32498799 ~ 32499410 (-) | True | G697774 |
| TU794745 | other | upstream | 771696 | 32989245 ~ 32990061 (-) | True | G698356 |
| TU795919 | other | upstream | 1725473 | 33943022 ~ 33952356 (-) | True | G699468 |
| TU795985 | other | upstream | 1805742 | 34023291 ~ 34023885 (-) | True | ankef1a |
| TU798118 | other | upstream | 3365449 | 35582998 ~ 35589877 (-) | True | G701454 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00035164 | True | 1132 | mRNA | 0.53 | 3 | NC_007131.7 | 113949 ~ 116999 (-) |
| grasscarp (Ctenopharyngodon idella) | TU141850 | True | 272 | lncRNA | 0.42 | 1 | CI01000024 | 6693450 ~ 6693721 (-) |
| grasscarp (Ctenopharyngodon idella) | CI01000135_00158065_00158568.mRNA | True | 1032 | mRNA | 0.45 | 2 | CI01000135 | 157415 ~ 158568 (-) |
| bowfin (Amia calva) | AMCG00004056 | False | 2271 | mRNA | 0.52 | 3 | CM030121.1 | 30888032 ~ 30894824 (+) |
| tiger barb (Puntius tetrazona) | TU141850 | False | 1352 | TUCP | 0.48 | 3 | NC_056711.1 | 22326710 ~ 22329260 (-) |
