RNA id: trnav-aac-136


Basic Information

Item Value
RNA id trnav-aac-136
length 73
RNA type mRNA
GC content 0.56
exon number 1
gene id trnav-aac-136
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 52672235 ~ 52672307 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtttccgtagtgtagtggttatcacgttcgcctaacacgcgaaaggtccccggttcgagaccgggcggaaaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU819453 lncRNA downstream 3789 52533209 ~ 52668446 (-) True G721245
TU819443 lncRNA downstream 15646 52589219 ~ 52656589 (-) True G721238
TU819447 lncRNA downstream 72099 52503689 ~ 52600136 (-) True trnav-cac-22
TU819440 lncRNA downstream 80279 52484057 ~ 52591956 (-) True G721236
TU819473 lncRNA upstream 46979 52719286 ~ 52726784 (-) False G721260
TU819474 lncRNA upstream 48480 52720787 ~ 52726784 (-) False G721260
TU819472 lncRNA upstream 52641 52724948 ~ 52726784 (-) True G721260
TU819504 lncRNA upstream 106071 52778378 ~ 52778596 (-) True G721288
TU819505 lncRNA upstream 106729 52779036 ~ 52779473 (-) True G721289
trnav-cac-46 mRNA downstream 130 52672033 ~ 52672105 (-) True trnav-cac-46
trnav-aac-135 mRNA downstream 1436 52670727 ~ 52670799 (-) True trnav-aac-135
trnav-aac-134 mRNA downstream 2918 52669245 ~ 52669317 (-) True trnav-aac-134
trnav-aac-133 mRNA downstream 4400 52667761 ~ 52667835 (-) True trnav-aac-133
trnav-aac-132 mRNA downstream 5833 52666330 ~ 52666402 (-) True trnav-aac-132
trnav-cac-47 mRNA upstream 1234 52673541 ~ 52673613 (-) True trnav-cac-47
trnav-aac-137 mRNA upstream 1436 52673743 ~ 52673815 (-) True trnav-aac-137
trnav-aac-138 mRNA upstream 2867 52675174 ~ 52675246 (-) True trnav-aac-138
trnav-cac-48 mRNA upstream 5360 52677667 ~ 52677739 (-) True trnav-cac-48
trnae-uuc-4 mRNA upstream 5545 52677852 ~ 52677924 (-) True trnae-uuc-4
TU817704 other downstream 1413216 51252355 ~ 51259019 (-) True LOC110530043
TU817090 other downstream 1732764 50936928 ~ 50939471 (-) True G719151
TU816422 other downstream 2782983 49866630 ~ 49889252 (-) False LOC110530011
TU816366 other downstream 2834539 49785674 ~ 49837696 (-) True G718489
TU814229 other downstream 3883273 48788521 ~ 48788962 (-) True G716488
TU819491 other upstream 88732 52761039 ~ 52761451 (-) True G721275
TU820029 other upstream 790875 53463182 ~ 53463764 (-) False LOC110529122
TU820769 other upstream 825841 53498148 ~ 53499730 (-) True G722459
TU820950 other upstream 1131136 53803443 ~ 53856065 (-) True G722602
TU821019 other upstream 1253921 53926228 ~ 53927959 (-) True G722670