Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU827679 |
| length | 1185 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 1 |
| gene id | LOC110530949 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 59111123 ~ 59146231 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU827190 | lncRNA | downstream | 3847 | 59107116 ~ 59107396 (-) | True | G728226 |
| TU827188 | lncRNA | downstream | 5012 | 59105888 ~ 59106231 (-) | True | G728224 |
| TU827186 | lncRNA | downstream | 5413 | 59104752 ~ 59105830 (-) | True | G728222 |
| TU827010 | lncRNA | downstream | 129963 | 58980900 ~ 58981280 (-) | True | G728058 |
| TU826828 | lncRNA | downstream | 265903 | 58845060 ~ 58845340 (-) | True | G727888 |
| TU827727 | lncRNA | upstream | 50131 | 59162558 ~ 59165729 (-) | True | G728711 |
| TU827728 | lncRNA | upstream | 50956 | 59163383 ~ 59167725 (-) | True | G728712 |
| TU827742 | lncRNA | upstream | 72894 | 59185321 ~ 59185625 (-) | True | G728725 |
| TU827766 | lncRNA | upstream | 168572 | 59280999 ~ 59281213 (-) | True | G728749 |
| TU827701 | lncRNA | upstream | 174501 | 59286928 ~ 59288820 (-) | False | LOC110530240 |
| XM_021613131.2 | mRNA | downstream | 633601 | 58476472 ~ 58477642 (-) | True | LOC110530234 |
| XR_005052925.1 | mRNA | downstream | 920247 | 58182632 ~ 58190996 (-) | False | LOC118965534 |
| trnav-aac-153 | mRNA | downstream | 1187949 | 57923222 ~ 57923294 (-) | True | trnav-aac-153 |
| trnaw-cca-3 | mRNA | downstream | 1189469 | 57921703 ~ 57921774 (-) | True | trnaw-cca-3 |
| XM_036985795.1 | mRNA | downstream | 1201103 | 57876797 ~ 57910140 (-) | True | LOC110530229 |
| XM_021613138.2 | mRNA | upstream | 101967 | 59214394 ~ 59243807 (-) | False | LOC110530239 |
| XM_021613139.2 | mRNA | upstream | 101967 | 59214394 ~ 59248869 (-) | False | LOC110530239 |
| XM_036985813.1 | mRNA | upstream | 104027 | 59216454 ~ 59243810 (-) | True | LOC110530239 |
| XM_021613136.2 | mRNA | upstream | 137275 | 59249702 ~ 59279534 (-) | False | LOC110530238 |
| XM_021613135.2 | mRNA | upstream | 137275 | 59249702 ~ 59279537 (-) | True | LOC110530238 |
| TU825771 | other | downstream | 1247366 | 57862738 ~ 57863877 (-) | True | LOC110530228 |
| TU825774 | other | downstream | 1264554 | 57820047 ~ 57846689 (-) | True | G726900 |
| TU825750 | other | downstream | 1299821 | 57805388 ~ 57811422 (-) | True | G726885 |
| TU825404 | other | downstream | 1805717 | 57286516 ~ 57305526 (-) | True | chd7 |
| TU825323 | other | downstream | 1974130 | 57136141 ~ 57137113 (-) | True | G726496 |
| TU831141 | other | upstream | 2932608 | 62045035 ~ 62048119 (-) | False | G731764 |
| TU831229 | other | upstream | 3068260 | 62180687 ~ 62185180 (-) | True | LOC110530961 |
| TU835604 | other | upstream | 5877874 | 64990301 ~ 65040241 (-) | True | G735880 |
| TU835971 | other | upstream | 6405740 | 65518167 ~ 65528583 (-) | True | G736216 |
| TU836724 | other | upstream | 6988669 | 66101096 ~ 66101627 (-) | True | G736841 |
